Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabra1P62812 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gabra1P62812 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.17□□□□□ -0.14
Gabra1P62812 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gabra1P62812 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Gabra1P62812 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabra1P62812 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Gabra1P62812 Gm38285-201ENSMUST00000192928 922 ntBASIC14.16□□□□□ -0.14
Gabra1P62812 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.16□□□□□ -0.14
Gabra1P62812 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gabra1P62812 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gabra1P62812 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.16□□□□□ -0.14
Gabra1P62812 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gabra1P62812 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabra1P62812 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gabra1P62812 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gabra1P62812 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.15□□□□□ -0.14
Gabra1P62812 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Gabra1P62812 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gabra1P62812 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.15□□□□□ -0.14
Gabra1P62812 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gabra1P62812 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.15□□□□□ -0.14
Gabra1P62812 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gabra1P62812 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabra1P62812 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.15□□□□□ -0.15
Gabra1P62812 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Gabra1P62812 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Gabra1P62812 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gabra1P62812 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.14□□□□□ -0.15
Gabra1P62812 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Gabra1P62812 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.14□□□□□ -0.15
Gabra1P62812 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Gabra1P62812 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.14□□□□□ -0.15
Gabra1P62812 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Gabra1P62812 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.14□□□□□ -0.15
Gabra1P62812 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabra1P62812 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabra1P62812 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabra1P62812 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.13□□□□□ -0.15
Gabra1P62812 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabra1P62812 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gabra1P62812 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gabra1P62812 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms