Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm5P62322 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm5P62322 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lsm5P62322 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Lsm5P62322 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.05□□□□□ -0.16
Lsm5P62322 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Lsm5P62322 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Lsm5P62322 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm5P62322 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.05□□□□□ -0.16
Lsm5P62322 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.04□□□□□ -0.16
Lsm5P62322 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.04□□□□□ -0.16
Lsm5P62322 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.04□□□□□ -0.16
Lsm5P62322 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.04□□□□□ -0.16
Lsm5P62322 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.04□□□□□ -0.16
Lsm5P62322 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Lsm5P62322 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lsm5P62322 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Lsm5P62322 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.04□□□□□ -0.16
Lsm5P62322 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.04□□□□□ -0.16
Lsm5P62322 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lsm5P62322 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lsm5P62322 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm5P62322 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Lsm5P62322 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lsm5P62322 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.03□□□□□ -0.16
Lsm5P62322 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.03□□□□□ -0.16
Lsm5P62322 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lsm5P62322 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Lsm5P62322 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm5P62322 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lsm5P62322 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm5P62322 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm5P62322 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm5P62322 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm5P62322 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm5P62322 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm5P62322 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm5P62322 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Lsm5P62322 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms