Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sec61a1P61620 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sec61a1P61620 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Gm15375-201ENSMUST00000119510 849 ntBASIC14.78□□□□□ -0.04
Sec61a1P61620 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.78□□□□□ -0.04
Sec61a1P61620 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Sec61a1P61620 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Sec61a1P61620 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sec61a1P61620 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sec61a1P61620 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a1P61620 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a1P61620 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a1P61620 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a1P61620 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a1P61620 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a1P61620 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a1P61620 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a1P61620 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a1P61620 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a1P61620 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a1P61620 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Sec61a1P61620 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Sec61a1P61620 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sec61a1P61620 Mir1199-201ENSMUST00000117015 119 ntBASIC14.77□□□□□ -0.05
Sec61a1P61620 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.77□□□□□ -0.05
Sec61a1P61620 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a1P61620 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.77□□□□□ -0.05
Sec61a1P61620 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a1P61620 Gm42545-201ENSMUST00000202755 922 ntBASIC14.77□□□□□ -0.05
Sec61a1P61620 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a1P61620 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a1P61620 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a1P61620 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a1P61620 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a1P61620 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a1P61620 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a1P61620 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.77□□□□□ -0.05
Sec61a1P61620 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sec61a1P61620 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a1P61620 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a1P61620 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a1P61620 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a1P61620 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a1P61620 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a1P61620 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.76□□□□□ -0.05
Sec61a1P61620 Gm18025-201ENSMUST00000221733 862 ntBASIC14.76□□□□□ -0.05
Sec61a1P61620 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.76□□□□□ -0.05
Sec61a1P61620 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sec61a1P61620 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a1P61620 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a1P61620 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a1P61620 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a1P61620 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a1P61620 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a1P61620 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a1P61620 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sec61a1P61620 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a1P61620 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a1P61620 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a1P61620 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a1P61620 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a1P61620 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a1P61620 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.75□□□□□ -0.05
Sec61a1P61620 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a1P61620 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.75□□□□□ -0.05
Sec61a1P61620 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.75□□□□□ -0.05
Sec61a1P61620 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.75□□□□□ -0.05
Sec61a1P61620 Gm43183-201ENSMUST00000200632 547 ntBASIC14.75□□□□□ -0.05
Sec61a1P61620 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a1P61620 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Sec61a1P61620 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a1P61620 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sec61a1P61620 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a1P61620 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a1P61620 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sec61a1P61620 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sec61a1P61620 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.74□□□□□ -0.05
Sec61a1P61620 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sec61a1P61620 Gm715-201ENSMUST00000117865 831 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms