Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1bP61025 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12□□□□□ -0.49
Cks1bP61025 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Cks1bP61025 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cks1bP61025 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1bP61025 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12□□□□□ -0.49
Cks1bP61025 Gm37374-201ENSMUST00000194954 1829 ntBASIC12□□□□□ -0.49
Cks1bP61025 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12□□□□□ -0.49
Cks1bP61025 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cks1bP61025 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.99□□□□□ -0.49
Cks1bP61025 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC11.99□□□□□ -0.49
Cks1bP61025 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cks1bP61025 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cks1bP61025 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cks1bP61025 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.99□□□□□ -0.49
Cks1bP61025 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1bP61025 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cks1bP61025 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cks1bP61025 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
Cks1bP61025 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cks1bP61025 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Cks1bP61025 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cks1bP61025 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cks1bP61025 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cks1bP61025 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cks1bP61025 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cks1bP61025 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cks1bP61025 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cks1bP61025 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cks1bP61025 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cks1bP61025 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cks1bP61025 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cks1bP61025 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cks1bP61025 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cks1bP61025 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
Cks1bP61025 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Cks1bP61025 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cks1bP61025 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cks1bP61025 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cks1bP61025 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cks1bP61025 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC11.97□□□□□ -0.49
Cks1bP61025 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.97□□□□□ -0.49
Cks1bP61025 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cks1bP61025 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Cks1bP61025 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Gm22325-201ENSMUST00000158904 308 ntBASIC11.97□□□□□ -0.49
Cks1bP61025 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.97□□□□□ -0.49
Cks1bP61025 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC11.97□□□□□ -0.49
Cks1bP61025 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC11.97□□□□□ -0.49
Cks1bP61025 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Cks1bP61025 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cks1bP61025 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cks1bP61025 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.97□□□□□ -0.49
Cks1bP61025 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cks1bP61025 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cks1bP61025 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms