Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b6P59708 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b6P59708 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.91□□□□□ -0.02
Sf3b6P59708 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b6P59708 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Sf3b6P59708 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.91□□□□□ -0.02
Sf3b6P59708 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.91□□□□□ -0.02
Sf3b6P59708 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.91□□□□□ -0.02
Sf3b6P59708 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b6P59708 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b6P59708 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Sf3b6P59708 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.91□□□□□ -0.02
Sf3b6P59708 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Sf3b6P59708 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3b6P59708 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Sf3b6P59708 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Sf3b6P59708 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.9□□□□□ -0.02
Sf3b6P59708 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.9□□□□□ -0.02
Sf3b6P59708 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.9□□□□□ -0.02
Sf3b6P59708 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.9□□□□□ -0.02
Sf3b6P59708 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3b6P59708 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sf3b6P59708 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.89□□□□□ -0.03
Sf3b6P59708 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Sf3b6P59708 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.89□□□□□ -0.03
Sf3b6P59708 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.89□□□□□ -0.03
Sf3b6P59708 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sf3b6P59708 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.89□□□□□ -0.03
Sf3b6P59708 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sf3b6P59708 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Sf3b6P59708 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3b6P59708 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Sf3b6P59708 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.88□□□□□ -0.03
Sf3b6P59708 Gm10138-203ENSMUST00000206952 366 ntBASIC14.88□□□□□ -0.03
Sf3b6P59708 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Sf3b6P59708 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Sf3b6P59708 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.88□□□□□ -0.03
Sf3b6P59708 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.88□□□□□ -0.03
Sf3b6P59708 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sf3b6P59708 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sf3b6P59708 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.87□□□□□ -0.03
Sf3b6P59708 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sf3b6P59708 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms