Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Tubgcp3P58854 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tubgcp3P58854 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp3P58854 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp3P58854 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp3P58854 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp3P58854 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.12■□□□□ 0.33
Tubgcp3P58854 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp3P58854 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.12■□□□□ 0.33
Tubgcp3P58854 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp3P58854 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp3P58854 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp3P58854 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tubgcp3P58854 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp3P58854 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp3P58854 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp3P58854 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp3P58854 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp3P58854 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp3P58854 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp3P58854 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.09■□□□□ 0.33
Tubgcp3P58854 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Gm18958-201ENSMUST00000174258 762 ntBASIC17.09■□□□□ 0.33
Tubgcp3P58854 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.09■□□□□ 0.33
Tubgcp3P58854 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.09■□□□□ 0.33
Tubgcp3P58854 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubgcp3P58854 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tubgcp3P58854 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubgcp3P58854 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Tubgcp3P58854 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Tubgcp3P58854 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubgcp3P58854 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubgcp3P58854 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.08■□□□□ 0.33
Tubgcp3P58854 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubgcp3P58854 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubgcp3P58854 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubgcp3P58854 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.08■□□□□ 0.32
Tubgcp3P58854 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tubgcp3P58854 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.08■□□□□ 0.32
Tubgcp3P58854 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.08■□□□□ 0.32
Tubgcp3P58854 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.08■□□□□ 0.32
Tubgcp3P58854 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubgcp3P58854 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubgcp3P58854 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tubgcp3P58854 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubgcp3P58854 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubgcp3P58854 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubgcp3P58854 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Tubgcp3P58854 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tubgcp3P58854 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubgcp3P58854 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Tubgcp3P58854 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubgcp3P58854 Gm13216-201ENSMUST00000117145 591 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms