Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SmoP56726 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SmoP56726 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SmoP56726 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SmoP56726 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SmoP56726 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SmoP56726 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SmoP56726 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SmoP56726 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SmoP56726 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SmoP56726 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SmoP56726 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SmoP56726 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SmoP56726 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SmoP56726 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SmoP56726 Gm7284-201ENSMUST00000131667 944 ntBASIC16.86■□□□□ 0.29
SmoP56726 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SmoP56726 Gm29707-201ENSMUST00000196325 491 ntBASIC16.86■□□□□ 0.29
SmoP56726 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SmoP56726 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SmoP56726 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SmoP56726 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SmoP56726 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.86■□□□□ 0.29
SmoP56726 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SmoP56726 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SmoP56726 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.85■□□□□ 0.29
SmoP56726 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SmoP56726 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SmoP56726 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SmoP56726 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SmoP56726 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SmoP56726 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SmoP56726 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.85■□□□□ 0.29
SmoP56726 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SmoP56726 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.85■□□□□ 0.29
SmoP56726 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SmoP56726 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SmoP56726 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SmoP56726 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SmoP56726 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SmoP56726 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SmoP56726 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SmoP56726 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SmoP56726 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SmoP56726 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SmoP56726 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SmoP56726 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SmoP56726 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SmoP56726 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SmoP56726 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SmoP56726 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.84■□□□□ 0.29
SmoP56726 Gm14859-201ENSMUST00000117752 357 ntBASIC16.84■□□□□ 0.29
SmoP56726 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SmoP56726 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.84■□□□□ 0.29
SmoP56726 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SmoP56726 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SmoP56726 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SmoP56726 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SmoP56726 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SmoP56726 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SmoP56726 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SmoP56726 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SmoP56726 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SmoP56726 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.84■□□□□ 0.29
SmoP56726 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SmoP56726 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SmoP56726 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SmoP56726 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SmoP56726 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.83■□□□□ 0.28
SmoP56726 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SmoP56726 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SmoP56726 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.83■□□□□ 0.28
SmoP56726 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SmoP56726 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SmoP56726 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.83■□□□□ 0.28
SmoP56726 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SmoP56726 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SmoP56726 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SmoP56726 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SmoP56726 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SmoP56726 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SmoP56726 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.82■□□□□ 0.28
SmoP56726 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SmoP56726 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.82■□□□□ 0.28
SmoP56726 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SmoP56726 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.82■□□□□ 0.28
SmoP56726 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SmoP56726 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SmoP56726 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SmoP56726 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.82■□□□□ 0.28
SmoP56726 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.82■□□□□ 0.28
SmoP56726 Gm45328-201ENSMUST00000210942 917 ntBASIC16.82■□□□□ 0.28
SmoP56726 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SmoP56726 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SmoP56726 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SmoP56726 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SmoP56726 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SmoP56726 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SmoP56726 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SmoP56726 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms