Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.82■□□□□ 0.76
Irf5P56477 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Irf5P56477 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Irf5P56477 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Irf5P56477 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Irf5P56477 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Irf5P56477 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Irf5P56477 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Irf5P56477 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Irf5P56477 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Irf5P56477 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Irf5P56477 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Irf5P56477 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Irf5P56477 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Irf5P56477 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Irf5P56477 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Irf5P56477 Mir3081-201ENSMUST00000175305 84 ntBASIC19.81■□□□□ 0.76
Irf5P56477 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.81■□□□□ 0.76
Irf5P56477 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.81■□□□□ 0.76
Irf5P56477 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Irf5P56477 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Irf5P56477 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Irf5P56477 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Irf5P56477 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.81■□□□□ 0.76
Irf5P56477 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf5P56477 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf5P56477 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf5P56477 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Irf5P56477 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf5P56477 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf5P56477 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Irf5P56477 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf5P56477 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf5P56477 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf5P56477 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Irf5P56477 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.8■□□□□ 0.76
Irf5P56477 Gm26039-201ENSMUST00000158152 144 ntBASIC19.8■□□□□ 0.76
Irf5P56477 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Irf5P56477 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.8■□□□□ 0.76
Irf5P56477 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.8■□□□□ 0.76
Irf5P56477 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Irf5P56477 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf5P56477 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.8■□□□□ 0.76
Irf5P56477 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf5P56477 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Irf5P56477 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf5P56477 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Irf5P56477 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.79■□□□□ 0.76
Irf5P56477 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf5P56477 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf5P56477 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.79■□□□□ 0.76
Irf5P56477 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf5P56477 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Irf5P56477 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf5P56477 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Irf5P56477 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf5P56477 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Irf5P56477 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf5P56477 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf5P56477 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Irf5P56477 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Irf5P56477 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Irf5P56477 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.79■□□□□ 0.76
Irf5P56477 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf5P56477 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Irf5P56477 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf5P56477 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf5P56477 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf5P56477 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf5P56477 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.78■□□□□ 0.76
Irf5P56477 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Irf5P56477 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf5P56477 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Irf5P56477 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf5P56477 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf5P56477 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.78■□□□□ 0.76
Irf5P56477 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Irf5P56477 Gm18115-201ENSMUST00000221209 621 ntBASIC19.78■□□□□ 0.76
Irf5P56477 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.78■□□□□ 0.76
Irf5P56477 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf5P56477 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Irf5P56477 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Irf5P56477 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Irf5P56477 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf5P56477 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Irf5P56477 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf5P56477 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf5P56477 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.77■□□□□ 0.76
Irf5P56477 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Irf5P56477 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Irf5P56477 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Irf5P56477 Actl10-202ENSMUST00000226583 1501 ntBASIC19.77■□□□□ 0.76
Irf5P56477 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Irf5P56477 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf5P56477 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf5P56477 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf5P56477 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf5P56477 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf5P56477 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf5P56477 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms