Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.3■□□□□ 0.04
Cdh11P55288 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cdh11P55288 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cdh11P55288 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Cdh11P55288 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 Dancr-204ENSMUST00000132389 2347 ntBASIC15.29■□□□□ 0.04
Cdh11P55288 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Cdh11P55288 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdh11P55288 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.29■□□□□ 0.04
Cdh11P55288 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.29■□□□□ 0.04
Cdh11P55288 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cdh11P55288 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cdh11P55288 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.29■□□□□ 0.04
Cdh11P55288 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.29■□□□□ 0.04
Cdh11P55288 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cdh11P55288 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdh11P55288 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.28■□□□□ 0.04
Cdh11P55288 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cdh11P55288 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.28■□□□□ 0.04
Cdh11P55288 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.28■□□□□ 0.04
Cdh11P55288 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.28■□□□□ 0.04
Cdh11P55288 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cdh11P55288 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Gm5417-201ENSMUST00000079706 384 ntBASIC15.28■□□□□ 0.04
Cdh11P55288 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.28■□□□□ 0.04
Cdh11P55288 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdh11P55288 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh11P55288 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh11P55288 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Cdh11P55288 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh11P55288 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.27■□□□□ 0.04
Cdh11P55288 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh11P55288 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh11P55288 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.27■□□□□ 0.04
Cdh11P55288 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh11P55288 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh11P55288 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh11P55288 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh11P55288 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh11P55288 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh11P55288 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh11P55288 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.27■□□□□ 0.04
Cdh11P55288 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.27■□□□□ 0.04
Cdh11P55288 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh11P55288 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdh11P55288 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh11P55288 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh11P55288 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Cdh11P55288 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh11P55288 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh11P55288 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.26■□□□□ 0.03
Cdh11P55288 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh11P55288 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh11P55288 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh11P55288 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh11P55288 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdh11P55288 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh11P55288 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh11P55288 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms