Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cdh5P55284 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh5P55284 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh5P55284 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.35■□□□□ 0.21
Cdh5P55284 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdh5P55284 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cdh5P55284 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cdh5P55284 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.34■□□□□ 0.21
Cdh5P55284 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.34■□□□□ 0.21
Cdh5P55284 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cdh5P55284 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cdh5P55284 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh5P55284 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Cdh5P55284 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdh5P55284 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdh5P55284 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdh5P55284 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdh5P55284 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Cdh5P55284 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.33■□□□□ 0.2
Cdh5P55284 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Gm5417-201ENSMUST00000079706 384 ntBASIC16.33■□□□□ 0.2
Cdh5P55284 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Cdh5P55284 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.33■□□□□ 0.2
Cdh5P55284 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cdh5P55284 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.33■□□□□ 0.2
Cdh5P55284 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cdh5P55284 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh5P55284 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh5P55284 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdh5P55284 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh5P55284 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh5P55284 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cdh5P55284 Gm15565-201ENSMUST00000118890 427 ntBASIC16.32■□□□□ 0.2
Cdh5P55284 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.32■□□□□ 0.2
Cdh5P55284 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.32■□□□□ 0.2
Cdh5P55284 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdh5P55284 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.32■□□□□ 0.2
Cdh5P55284 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh5P55284 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cdh5P55284 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh5P55284 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cdh5P55284 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh5P55284 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh5P55284 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cdh5P55284 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh5P55284 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh5P55284 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh5P55284 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh5P55284 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cdh5P55284 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cdh5P55284 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh5P55284 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cdh5P55284 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh5P55284 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh5P55284 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh5P55284 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Cdh5P55284 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh5P55284 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh5P55284 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh5P55284 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh5P55284 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh5P55284 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cdh5P55284 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh5P55284 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh5P55284 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms