Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NcanP55066 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.69■□□□□ 0.42
NcanP55066 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.69■□□□□ 0.42
NcanP55066 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NcanP55066 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NcanP55066 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.69■□□□□ 0.42
NcanP55066 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NcanP55066 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NcanP55066 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NcanP55066 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NcanP55066 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NcanP55066 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NcanP55066 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NcanP55066 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.69■□□□□ 0.42
NcanP55066 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NcanP55066 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NcanP55066 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NcanP55066 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NcanP55066 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NcanP55066 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.68■□□□□ 0.42
NcanP55066 Gm11424-201ENSMUST00000121929 829 ntBASIC17.68■□□□□ 0.42
NcanP55066 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NcanP55066 Mir3113-201ENSMUST00000175478 76 ntBASIC17.68■□□□□ 0.42
NcanP55066 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.68■□□□□ 0.42
NcanP55066 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NcanP55066 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NcanP55066 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NcanP55066 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NcanP55066 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NcanP55066 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NcanP55066 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NcanP55066 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NcanP55066 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.68■□□□□ 0.42
NcanP55066 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NcanP55066 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NcanP55066 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NcanP55066 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NcanP55066 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NcanP55066 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.67■□□□□ 0.42
NcanP55066 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NcanP55066 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NcanP55066 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.67■□□□□ 0.42
NcanP55066 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NcanP55066 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NcanP55066 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.67■□□□□ 0.42
NcanP55066 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NcanP55066 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
NcanP55066 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NcanP55066 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NcanP55066 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NcanP55066 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NcanP55066 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NcanP55066 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NcanP55066 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
NcanP55066 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NcanP55066 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NcanP55066 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NcanP55066 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NcanP55066 Gm14127-201ENSMUST00000117906 678 ntBASIC17.66■□□□□ 0.42
NcanP55066 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NcanP55066 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NcanP55066 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NcanP55066 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NcanP55066 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
NcanP55066 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.66■□□□□ 0.42
NcanP55066 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.66■□□□□ 0.42
NcanP55066 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NcanP55066 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.66■□□□□ 0.42
NcanP55066 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NcanP55066 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.66■□□□□ 0.42
NcanP55066 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NcanP55066 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.66■□□□□ 0.42
NcanP55066 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NcanP55066 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NcanP55066 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NcanP55066 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NcanP55066 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NcanP55066 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NcanP55066 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NcanP55066 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NcanP55066 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.65■□□□□ 0.42
NcanP55066 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.65■□□□□ 0.42
NcanP55066 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
NcanP55066 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.65■□□□□ 0.42
NcanP55066 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.65■□□□□ 0.42
NcanP55066 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.65■□□□□ 0.42
NcanP55066 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.65■□□□□ 0.42
NcanP55066 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NcanP55066 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NcanP55066 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NcanP55066 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NcanP55066 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NcanP55066 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NcanP55066 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NcanP55066 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.64■□□□□ 0.41
NcanP55066 Gm4459-201ENSMUST00000118750 468 ntBASIC17.64■□□□□ 0.41
NcanP55066 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.64■□□□□ 0.41
NcanP55066 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NcanP55066 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NcanP55066 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms