Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Nub1P54729 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.03■□□□□ 0.48
Nub1P54729 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nub1P54729 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nub1P54729 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nub1P54729 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Nub1P54729 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.03■□□□□ 0.48
Nub1P54729 Mir5130-201ENSMUST00000175160 84 ntBASIC18.03■□□□□ 0.48
Nub1P54729 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Nub1P54729 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nub1P54729 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.03■□□□□ 0.48
Nub1P54729 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.03■□□□□ 0.48
Nub1P54729 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nub1P54729 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nub1P54729 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nub1P54729 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nub1P54729 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Nub1P54729 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nub1P54729 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Nub1P54729 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nub1P54729 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nub1P54729 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Nub1P54729 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nub1P54729 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nub1P54729 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nub1P54729 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.02■□□□□ 0.48
Nub1P54729 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.02■□□□□ 0.48
Nub1P54729 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.02■□□□□ 0.48
Nub1P54729 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.02■□□□□ 0.48
Nub1P54729 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nub1P54729 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nub1P54729 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nub1P54729 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nub1P54729 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nub1P54729 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Nub1P54729 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nub1P54729 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
Nub1P54729 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Nub1P54729 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nub1P54729 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nub1P54729 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.01■□□□□ 0.47
Nub1P54729 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nub1P54729 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.01■□□□□ 0.47
Nub1P54729 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Nub1P54729 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nub1P54729 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nub1P54729 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.01■□□□□ 0.47
Nub1P54729 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Nub1P54729 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nub1P54729 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nub1P54729 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Nub1P54729 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.01■□□□□ 0.47
Nub1P54729 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nub1P54729 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nub1P54729 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nub1P54729 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nub1P54729 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.01■□□□□ 0.47
Nub1P54729 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nub1P54729 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nub1P54729 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nub1P54729 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nub1P54729 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nub1P54729 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nub1P54729 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nub1P54729 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nub1P54729 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Nub1P54729 Gm13474-201ENSMUST00000122466 815 ntBASIC18■□□□□ 0.47
Nub1P54729 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18■□□□□ 0.47
Nub1P54729 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nub1P54729 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nub1P54729 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18■□□□□ 0.47
Nub1P54729 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Nub1P54729 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nub1P54729 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nub1P54729 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nub1P54729 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18■□□□□ 0.47
Nub1P54729 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nub1P54729 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Nub1P54729 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18■□□□□ 0.47
Nub1P54729 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nub1P54729 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nub1P54729 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Nub1P54729 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.99■□□□□ 0.47
Nub1P54729 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 Gm10231-201ENSMUST00000181584 441 ntBASIC17.99■□□□□ 0.47
Nub1P54729 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 Gm10175-202ENSMUST00000208752 441 ntBASIC17.99■□□□□ 0.47
Nub1P54729 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.99■□□□□ 0.47
Nub1P54729 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nub1P54729 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Nub1P54729 Gm10566-201ENSMUST00000086739 996 ntBASIC17.99■□□□□ 0.47
Nub1P54729 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms