Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brca1P48754 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Brca1P48754 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Brca1P48754 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Brca1P48754 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brca1P48754 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.81■□□□□ 0.6
Brca1P48754 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Brca1P48754 Gm27628-201ENSMUST00000184911 107 ntBASIC18.81■□□□□ 0.6
Brca1P48754 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brca1P48754 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.81■□□□□ 0.6
Brca1P48754 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.81■□□□□ 0.6
Brca1P48754 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Brca1P48754 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brca1P48754 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Brca1P48754 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brca1P48754 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.8■□□□□ 0.6
Brca1P48754 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brca1P48754 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.8■□□□□ 0.6
Brca1P48754 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.8■□□□□ 0.6
Brca1P48754 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Brca1P48754 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brca1P48754 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brca1P48754 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.8■□□□□ 0.6
Brca1P48754 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brca1P48754 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brca1P48754 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brca1P48754 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brca1P48754 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Brca1P48754 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.79■□□□□ 0.6
Brca1P48754 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Brca1P48754 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Brca1P48754 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Brca1P48754 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Brca1P48754 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.79■□□□□ 0.6
Brca1P48754 Gm4459-201ENSMUST00000118750 468 ntBASIC18.79■□□□□ 0.6
Brca1P48754 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.79■□□□□ 0.6
Brca1P48754 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.79■□□□□ 0.6
Brca1P48754 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Brca1P48754 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.79■□□□□ 0.6
Brca1P48754 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brca1P48754 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Brca1P48754 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.79■□□□□ 0.6
Brca1P48754 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Brca1P48754 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brca1P48754 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Brca1P48754 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Brca1P48754 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Brca1P48754 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brca1P48754 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Brca1P48754 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brca1P48754 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brca1P48754 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brca1P48754 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.78■□□□□ 0.6
Brca1P48754 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.78■□□□□ 0.6
Brca1P48754 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.78■□□□□ 0.6
Brca1P48754 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brca1P48754 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brca1P48754 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brca1P48754 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.78■□□□□ 0.6
Brca1P48754 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brca1P48754 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brca1P48754 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brca1P48754 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.77■□□□□ 0.6
Brca1P48754 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Brca1P48754 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brca1P48754 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Brca1P48754 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.77■□□□□ 0.6
Brca1P48754 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.77■□□□□ 0.6
Brca1P48754 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.77■□□□□ 0.6
Brca1P48754 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brca1P48754 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brca1P48754 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brca1P48754 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Brca1P48754 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Brca1P48754 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Brca1P48754 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Brca1P48754 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Brca1P48754 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.77■□□□□ 0.59
Brca1P48754 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Brca1P48754 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Brca1P48754 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Brca1P48754 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Brca1P48754 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.77■□□□□ 0.59
Brca1P48754 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brca1P48754 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.76■□□□□ 0.59
Brca1P48754 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Brca1P48754 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brca1P48754 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.76■□□□□ 0.59
Brca1P48754 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brca1P48754 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brca1P48754 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.76■□□□□ 0.59
Brca1P48754 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Brca1P48754 Gm25406-201ENSMUST00000157599 105 ntBASIC18.76■□□□□ 0.59
Brca1P48754 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.76■□□□□ 0.59
Brca1P48754 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Brca1P48754 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brca1P48754 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Brca1P48754 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brca1P48754 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.75■□□□□ 0.59
Brca1P48754 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms