Protein–RNA interactions for Protein: P47963

Rpl13, 60S ribosomal protein L13, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13P47963 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl13P47963 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rpl13P47963 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl13P47963 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rpl13P47963 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl13P47963 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl13P47963 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rpl13P47963 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.34■□□□□ 0.53
Rpl13P47963 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rpl13P47963 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl13P47963 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rpl13P47963 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl13P47963 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl13P47963 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.34■□□□□ 0.53
Rpl13P47963 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.34■□□□□ 0.53
Rpl13P47963 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl13P47963 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl13P47963 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl13P47963 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rpl13P47963 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.34■□□□□ 0.53
Rpl13P47963 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl13P47963 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl13P47963 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rpl13P47963 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13P47963 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13P47963 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13P47963 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13P47963 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13P47963 Gm2274-201ENSMUST00000184539 609 ntBASIC18.33■□□□□ 0.52
Rpl13P47963 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Rpl13P47963 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Rpl13P47963 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13P47963 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13P47963 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13P47963 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13P47963 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13P47963 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Rpl13P47963 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13P47963 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl13P47963 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.32■□□□□ 0.52
Rpl13P47963 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.32■□□□□ 0.52
Rpl13P47963 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rpl13P47963 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.32■□□□□ 0.52
Rpl13P47963 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.32■□□□□ 0.52
Rpl13P47963 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.32■□□□□ 0.52
Rpl13P47963 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rpl13P47963 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl13P47963 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl13P47963 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl13P47963 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl13P47963 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl13P47963 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.31■□□□□ 0.52
Rpl13P47963 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl13P47963 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Rpl13P47963 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Rpl13P47963 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl13P47963 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl13P47963 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.31■□□□□ 0.52
Rpl13P47963 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rpl13P47963 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl13P47963 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl13P47963 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl13P47963 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rpl13P47963 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl13P47963 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13P47963 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rpl13P47963 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13P47963 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13P47963 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.3■□□□□ 0.52
Rpl13P47963 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.3■□□□□ 0.52
Rpl13P47963 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13P47963 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13P47963 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.3■□□□□ 0.52
Rpl13P47963 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.3■□□□□ 0.52
Rpl13P47963 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13P47963 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13P47963 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13P47963 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13P47963 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rpl13P47963 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13P47963 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13P47963 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl13P47963 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms