Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps4bP46467 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Vps4bP46467 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Vps4bP46467 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps4bP46467 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Vps4bP46467 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vps4bP46467 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4bP46467 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4bP46467 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.01■□□□□ 0.31
Vps4bP46467 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4bP46467 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Vps4bP46467 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4bP46467 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4bP46467 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.01■□□□□ 0.31
Vps4bP46467 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Vps4bP46467 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4bP46467 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.01■□□□□ 0.31
Vps4bP46467 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4bP46467 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4bP46467 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4bP46467 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4bP46467 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.01■□□□□ 0.31
Vps4bP46467 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4bP46467 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4bP46467 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4bP46467 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps4bP46467 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.01■□□□□ 0.31
Vps4bP46467 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17■□□□□ 0.31
Vps4bP46467 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17■□□□□ 0.31
Vps4bP46467 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17■□□□□ 0.31
Vps4bP46467 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Vps4bP46467 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Vps4bP46467 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps4bP46467 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.99■□□□□ 0.31
Vps4bP46467 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4bP46467 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4bP46467 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4bP46467 Gm12085-201ENSMUST00000119263 940 ntBASIC16.99■□□□□ 0.31
Vps4bP46467 Gm7638-201ENSMUST00000121348 967 ntBASIC16.99■□□□□ 0.31
Vps4bP46467 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4bP46467 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4bP46467 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.99■□□□□ 0.31
Vps4bP46467 Gm38027-201ENSMUST00000192315 235 ntBASIC16.99■□□□□ 0.31
Vps4bP46467 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.99■□□□□ 0.31
Vps4bP46467 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.99■□□□□ 0.31
Vps4bP46467 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4bP46467 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4bP46467 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4bP46467 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4bP46467 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4bP46467 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4bP46467 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.99■□□□□ 0.31
Vps4bP46467 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4bP46467 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4bP46467 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4bP46467 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4bP46467 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Vps4bP46467 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4bP46467 Il3ra-202ENSMUST00000223589 738 ntBASIC16.98■□□□□ 0.31
Vps4bP46467 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Vps4bP46467 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4bP46467 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4bP46467 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Vps4bP46467 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4bP46467 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4bP46467 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4bP46467 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4bP46467 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4bP46467 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Vps4bP46467 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4bP46467 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4bP46467 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4bP46467 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4bP46467 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.97■□□□□ 0.31
Vps4bP46467 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Vps4bP46467 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4bP46467 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.97■□□□□ 0.31
Vps4bP46467 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.97■□□□□ 0.31
Vps4bP46467 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4bP46467 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4bP46467 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms