Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nkx2-6P43688 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.85■□□□□ 0.13
Nkx2-6P43688 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Gm15794-201ENSMUST00000120182 631 ntBASIC15.84■□□□□ 0.13
Nkx2-6P43688 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-6P43688 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx2-6P43688 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx2-6P43688 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Nkx2-6P43688 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-6P43688 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-6P43688 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Nkx2-6P43688 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.83■□□□□ 0.12
Nkx2-6P43688 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.83■□□□□ 0.12
Nkx2-6P43688 Gm18115-201ENSMUST00000221209 621 ntBASIC15.83■□□□□ 0.12
Nkx2-6P43688 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.83■□□□□ 0.12
Nkx2-6P43688 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-6P43688 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Nkx2-6P43688 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-6P43688 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-6P43688 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Nkx2-6P43688 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Olfr129-201ENSMUST00000122318 993 ntBASIC15.82■□□□□ 0.12
Nkx2-6P43688 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-6P43688 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-6P43688 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-6P43688 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Nkx2-6P43688 Gm11336-201ENSMUST00000118168 334 ntBASIC15.81■□□□□ 0.12
Nkx2-6P43688 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.81■□□□□ 0.12
Nkx2-6P43688 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-6P43688 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-6P43688 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-6P43688 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-6P43688 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Nkx2-6P43688 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.81■□□□□ 0.12
Nkx2-6P43688 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-6P43688 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nkx2-6P43688 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-6P43688 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms