Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.03■□□□□ 0.16
Sox18P43680 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Sox18P43680 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox18P43680 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox18P43680 Gm23935-201ENSMUST00000102303 57 ntBASIC16.03■□□□□ 0.16
Sox18P43680 Gm24270-201ENSMUST00000102326 57 ntBASIC16.03■□□□□ 0.16
Sox18P43680 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sox18P43680 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Sox18P43680 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox18P43680 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox18P43680 Gm24245-201ENSMUST00000157318 57 ntBASIC16.03■□□□□ 0.16
Sox18P43680 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox18P43680 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.03■□□□□ 0.16
Sox18P43680 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox18P43680 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox18P43680 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox18P43680 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox18P43680 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox18P43680 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sox18P43680 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sox18P43680 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.03■□□□□ 0.16
Sox18P43680 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox18P43680 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox18P43680 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox18P43680 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox18P43680 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox18P43680 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Sox18P43680 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Sox18P43680 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Sox18P43680 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox18P43680 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox18P43680 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.02■□□□□ 0.16
Sox18P43680 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Sox18P43680 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox18P43680 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.02■□□□□ 0.16
Sox18P43680 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox18P43680 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Sox18P43680 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Sox18P43680 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sox18P43680 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox18P43680 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox18P43680 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox18P43680 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox18P43680 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox18P43680 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox18P43680 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox18P43680 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sox18P43680 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.01■□□□□ 0.15
Sox18P43680 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sox18P43680 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sox18P43680 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Gm11336-201ENSMUST00000118168 334 ntBASIC16.01■□□□□ 0.15
Sox18P43680 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Gm44357-201ENSMUST00000195897 142 ntBASIC16.01■□□□□ 0.15
Sox18P43680 Gm19658-201ENSMUST00000196231 138 ntBASIC16.01■□□□□ 0.15
Sox18P43680 Gm44367-201ENSMUST00000196836 138 ntBASIC16.01■□□□□ 0.15
Sox18P43680 Gm44350-201ENSMUST00000197197 138 ntBASIC16.01■□□□□ 0.15
Sox18P43680 Gm44390-201ENSMUST00000197533 144 ntBASIC16.01■□□□□ 0.15
Sox18P43680 Gm44313-201ENSMUST00000198018 138 ntBASIC16.01■□□□□ 0.15
Sox18P43680 Gm44486-201ENSMUST00000198508 138 ntBASIC16.01■□□□□ 0.15
Sox18P43680 Gm44454-201ENSMUST00000198541 138 ntBASIC16.01■□□□□ 0.15
Sox18P43680 Gm44314-201ENSMUST00000199263 138 ntBASIC16.01■□□□□ 0.15
Sox18P43680 Gm44394-201ENSMUST00000199558 138 ntBASIC16.01■□□□□ 0.15
Sox18P43680 Gm44484-201ENSMUST00000199873 138 ntBASIC16.01■□□□□ 0.15
Sox18P43680 Gm44466-201ENSMUST00000200264 138 ntBASIC16.01■□□□□ 0.15
Sox18P43680 Gm44359-201ENSMUST00000200671 138 ntBASIC16.01■□□□□ 0.15
Sox18P43680 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox18P43680 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.01■□□□□ 0.15
Sox18P43680 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox18P43680 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sox18P43680 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox18P43680 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox18P43680 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox18P43680 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sox18P43680 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox18P43680 Mir5126-201ENSMUST00000175513 77 ntBASIC16■□□□□ 0.15
Sox18P43680 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16■□□□□ 0.15
Sox18P43680 Gm13830-205ENSMUST00000201195 1155 ntBASIC16■□□□□ 0.15
Sox18P43680 AC160338.1-201ENSMUST00000214232 705 ntBASIC16■□□□□ 0.15
Sox18P43680 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Sox18P43680 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox18P43680 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox18P43680 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox18P43680 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sox18P43680 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox18P43680 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sox18P43680 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms