Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc2P43407 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.82■□□□□ 0.6
Sdc2P43407 Gm7638-201ENSMUST00000121348 967 ntBASIC18.82■□□□□ 0.6
Sdc2P43407 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc2P43407 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Sdc2P43407 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc2P43407 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc2P43407 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc2P43407 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sdc2P43407 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc2P43407 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc2P43407 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc2P43407 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
Sdc2P43407 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc2P43407 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sdc2P43407 Gm38027-201ENSMUST00000192315 235 ntBASIC18.81■□□□□ 0.6
Sdc2P43407 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc2P43407 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc2P43407 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc2P43407 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc2P43407 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc2P43407 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc2P43407 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc2P43407 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sdc2P43407 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sdc2P43407 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc2P43407 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc2P43407 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdc2P43407 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sdc2P43407 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sdc2P43407 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.8■□□□□ 0.6
Sdc2P43407 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sdc2P43407 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdc2P43407 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.8■□□□□ 0.6
Sdc2P43407 Gm27000-201ENSMUST00000182943 842 ntBASIC18.8■□□□□ 0.6
Sdc2P43407 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.8■□□□□ 0.6
Sdc2P43407 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sdc2P43407 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sdc2P43407 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdc2P43407 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sdc2P43407 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdc2P43407 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.8■□□□□ 0.6
Sdc2P43407 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.79■□□□□ 0.6
Sdc2P43407 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Mir1199-201ENSMUST00000117015 119 ntBASIC18.79■□□□□ 0.6
Sdc2P43407 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Gm13168-201ENSMUST00000121771 632 ntBASIC18.79■□□□□ 0.6
Sdc2P43407 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Sdc2P43407 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdc2P43407 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Sdc2P43407 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sdc2P43407 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sdc2P43407 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Sdc2P43407 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Sdc2P43407 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.78■□□□□ 0.6
Sdc2P43407 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdc2P43407 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc2P43407 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc2P43407 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc2P43407 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc2P43407 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc2P43407 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc2P43407 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc2P43407 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc2P43407 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc2P43407 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.77■□□□□ 0.6
Sdc2P43407 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.77■□□□□ 0.6
Sdc2P43407 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc2P43407 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc2P43407 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc2P43407 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sdc2P43407 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdc2P43407 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms