Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gdf6P43028 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Gdf6P43028 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.62■□□□□ 0.41
Gdf6P43028 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gdf6P43028 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Gdf6P43028 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gdf6P43028 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Gdf6P43028 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gdf6P43028 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gdf6P43028 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.62■□□□□ 0.41
Gdf6P43028 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gdf6P43028 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Gdf6P43028 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gdf6P43028 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.61■□□□□ 0.41
Gdf6P43028 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.61■□□□□ 0.41
Gdf6P43028 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gdf6P43028 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gdf6P43028 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gdf6P43028 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gdf6P43028 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gdf6P43028 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gdf6P43028 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.6■□□□□ 0.41
Gdf6P43028 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gdf6P43028 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gdf6P43028 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gdf6P43028 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Gdf6P43028 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gdf6P43028 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Gdf6P43028 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gdf6P43028 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gdf6P43028 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gdf6P43028 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gdf6P43028 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gdf6P43028 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gdf6P43028 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Gdf6P43028 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gdf6P43028 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gdf6P43028 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gdf6P43028 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.59■□□□□ 0.41
Gdf6P43028 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gdf6P43028 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gdf6P43028 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.59■□□□□ 0.41
Gdf6P43028 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.59■□□□□ 0.41
Gdf6P43028 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.59■□□□□ 0.41
Gdf6P43028 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gdf6P43028 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gdf6P43028 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Gdf6P43028 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gdf6P43028 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gdf6P43028 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gdf6P43028 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Gdf6P43028 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gdf6P43028 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Gdf6P43028 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.58■□□□□ 0.41
Gdf6P43028 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gdf6P43028 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Gdf6P43028 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gdf6P43028 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Gdf6P43028 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gdf6P43028 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.58■□□□□ 0.4
Gdf6P43028 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.58■□□□□ 0.4
Gdf6P43028 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.58■□□□□ 0.4
Gdf6P43028 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Gdf6P43028 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Gdf6P43028 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Gdf6P43028 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.58■□□□□ 0.4
Gdf6P43028 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gdf6P43028 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gdf6P43028 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gdf6P43028 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gdf6P43028 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Gdf6P43028 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gdf6P43028 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.57■□□□□ 0.4
Gdf6P43028 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gdf6P43028 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.57■□□□□ 0.4
Gdf6P43028 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Gdf6P43028 Gm7153-201ENSMUST00000117092 455 ntBASIC17.57■□□□□ 0.4
Gdf6P43028 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gdf6P43028 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.57■□□□□ 0.4
Gdf6P43028 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.57■□□□□ 0.4
Gdf6P43028 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Gdf6P43028 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gdf6P43028 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gdf6P43028 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gdf6P43028 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.57■□□□□ 0.4
Gdf6P43028 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gdf6P43028 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gdf6P43028 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gdf6P43028 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gdf6P43028 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.57■□□□□ 0.4
Gdf6P43028 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gdf6P43028 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gdf6P43028 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gdf6P43028 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gdf6P43028 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gdf6P43028 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.56■□□□□ 0.4
Gdf6P43028 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Gdf6P43028 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.56■□□□□ 0.4
Gdf6P43028 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.56■□□□□ 0.4
Gdf6P43028 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms