Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cxcl12P40224 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl12P40224 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl12P40224 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl12P40224 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cxcl12P40224 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl12P40224 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl12P40224 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Cxcl12P40224 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl12P40224 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.28■□□□□ 0.36
Cxcl12P40224 Gm6550-201ENSMUST00000187574 993 ntBASIC17.28■□□□□ 0.36
Cxcl12P40224 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cxcl12P40224 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl12P40224 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl12P40224 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl12P40224 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.28■□□□□ 0.36
Cxcl12P40224 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl12P40224 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cxcl12P40224 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl12P40224 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl12P40224 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl12P40224 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cxcl12P40224 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl12P40224 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl12P40224 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl12P40224 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl12P40224 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl12P40224 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.27■□□□□ 0.36
Cxcl12P40224 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl12P40224 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl12P40224 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.27■□□□□ 0.36
Cxcl12P40224 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.27■□□□□ 0.36
Cxcl12P40224 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl12P40224 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cxcl12P40224 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl12P40224 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cxcl12P40224 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cxcl12P40224 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cxcl12P40224 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cxcl12P40224 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cxcl12P40224 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.27■□□□□ 0.35
Cxcl12P40224 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cxcl12P40224 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cxcl12P40224 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cxcl12P40224 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cxcl12P40224 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cxcl12P40224 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cxcl12P40224 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cxcl12P40224 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cxcl12P40224 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cxcl12P40224 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cxcl12P40224 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Cxcl12P40224 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cxcl12P40224 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cxcl12P40224 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.26■□□□□ 0.35
Cxcl12P40224 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cxcl12P40224 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cxcl12P40224 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cxcl12P40224 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cxcl12P40224 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cxcl12P40224 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cxcl12P40224 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cxcl12P40224 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cxcl12P40224 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Cxcl12P40224 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cxcl12P40224 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cxcl12P40224 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cxcl12P40224 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cxcl12P40224 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cxcl12P40224 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Cxcl12P40224 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cxcl12P40224 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cxcl12P40224 Gm27628-201ENSMUST00000184911 107 ntBASIC17.25■□□□□ 0.35
Cxcl12P40224 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.25■□□□□ 0.35
Cxcl12P40224 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.25■□□□□ 0.35
Cxcl12P40224 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.25■□□□□ 0.35
Cxcl12P40224 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cxcl12P40224 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cxcl12P40224 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cxcl12P40224 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cxcl12P40224 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cxcl12P40224 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cxcl12P40224 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cxcl12P40224 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cxcl12P40224 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cxcl12P40224 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cxcl12P40224 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cxcl12P40224 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cxcl12P40224 Gm13036-201ENSMUST00000117799 748 ntBASIC17.24■□□□□ 0.35
Cxcl12P40224 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.24■□□□□ 0.35
Cxcl12P40224 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.24■□□□□ 0.35
Cxcl12P40224 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cxcl12P40224 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cxcl12P40224 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cxcl12P40224 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cxcl12P40224 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cxcl12P40224 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cxcl12P40224 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cxcl12P40224 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Cxcl12P40224 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms