Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Mmp13P33435 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.17■□□□□ 0.34
Mmp13P33435 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.17■□□□□ 0.34
Mmp13P33435 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.17■□□□□ 0.34
Mmp13P33435 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Mmp13P33435 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Mmp13P33435 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.17■□□□□ 0.34
Mmp13P33435 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Mmp13P33435 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.17■□□□□ 0.34
Mmp13P33435 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Mir5122-201ENSMUST00000175004 89 ntBASIC17.16■□□□□ 0.34
Mmp13P33435 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.16■□□□□ 0.34
Mmp13P33435 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Mmp13P33435 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.16■□□□□ 0.34
Mmp13P33435 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Mmp13P33435 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Mmp13P33435 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Mmp13P33435 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.16■□□□□ 0.34
Mmp13P33435 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Mmp13P33435 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.15■□□□□ 0.34
Mmp13P33435 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Mmp13P33435 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Mir7071-201ENSMUST00000184847 69 ntBASIC17.15■□□□□ 0.34
Mmp13P33435 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.15■□□□□ 0.34
Mmp13P33435 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Gm5417-201ENSMUST00000079706 384 ntBASIC17.15■□□□□ 0.34
Mmp13P33435 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Mmp13P33435 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.15■□□□□ 0.34
Mmp13P33435 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.15■□□□□ 0.34
Mmp13P33435 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Mmp13P33435 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Mmp13P33435 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Dancr-204ENSMUST00000132389 2347 ntBASIC17.14■□□□□ 0.33
Mmp13P33435 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Mmp13P33435 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Gm10517-202ENSMUST00000192970 758 ntBASIC17.14■□□□□ 0.33
Mmp13P33435 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.14■□□□□ 0.33
Mmp13P33435 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.14■□□□□ 0.33
Mmp13P33435 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.14■□□□□ 0.33
Mmp13P33435 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Mmp13P33435 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms