Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Mmp13P33435 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.17■□□□□ 0.34
Mmp13P33435 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.17■□□□□ 0.34
Mmp13P33435 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.17■□□□□ 0.34
Mmp13P33435 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Mmp13P33435 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Mmp13P33435 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.17■□□□□ 0.34
Mmp13P33435 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Mmp13P33435 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.17■□□□□ 0.34
Mmp13P33435 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp13P33435 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Mir5122-201ENSMUST00000175004 89 ntBASIC17.16■□□□□ 0.34
Mmp13P33435 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.16■□□□□ 0.34
Mmp13P33435 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Mmp13P33435 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.16■□□□□ 0.34
Mmp13P33435 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Mmp13P33435 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Mmp13P33435 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Mmp13P33435 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.16■□□□□ 0.34
Mmp13P33435 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp13P33435 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Mmp13P33435 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.15■□□□□ 0.34
Mmp13P33435 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Mmp13P33435 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Mir7071-201ENSMUST00000184847 69 ntBASIC17.15■□□□□ 0.34
Mmp13P33435 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.15■□□□□ 0.34
Mmp13P33435 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Gm5417-201ENSMUST00000079706 384 ntBASIC17.15■□□□□ 0.34
Mmp13P33435 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Mmp13P33435 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.15■□□□□ 0.34
Mmp13P33435 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.15■□□□□ 0.34
Mmp13P33435 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp13P33435 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Mmp13P33435 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Mmp13P33435 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Dancr-204ENSMUST00000132389 2347 ntBASIC17.14■□□□□ 0.33
Mmp13P33435 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Mmp13P33435 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Gm10517-202ENSMUST00000192970 758 ntBASIC17.14■□□□□ 0.33
Mmp13P33435 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.14■□□□□ 0.33
Mmp13P33435 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.14■□□□□ 0.33
Mmp13P33435 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp13P33435 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.14■□□□□ 0.33
Mmp13P33435 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Mmp13P33435 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp13P33435 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms