Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.31□□□□□ -0.28
Rom1P32958 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rom1P32958 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Rom1P32958 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.31□□□□□ -0.28
Rom1P32958 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Rom1P32958 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Rom1P32958 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.31□□□□□ -0.28
Rom1P32958 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rom1P32958 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Rom1P32958 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.31□□□□□ -0.28
Rom1P32958 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.31□□□□□ -0.28
Rom1P32958 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rom1P32958 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rom1P32958 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Rom1P32958 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rom1P32958 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rom1P32958 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rom1P32958 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rom1P32958 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Rom1P32958 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.3□□□□□ -0.28
Rom1P32958 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Rom1P32958 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Rom1P32958 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.3□□□□□ -0.28
Rom1P32958 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.3□□□□□ -0.28
Rom1P32958 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rom1P32958 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.29□□□□□ -0.28
Rom1P32958 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Rom1P32958 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
Rom1P32958 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.29□□□□□ -0.28
Rom1P32958 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Rom1P32958 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.29□□□□□ -0.28
Rom1P32958 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rom1P32958 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rom1P32958 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rom1P32958 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rom1P32958 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Rom1P32958 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rom1P32958 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.28□□□□□ -0.28
Rom1P32958 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.28□□□□□ -0.28
Rom1P32958 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rom1P32958 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rom1P32958 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rom1P32958 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rom1P32958 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rom1P32958 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms