Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6aP27664 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6aP27664 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.44■□□□□ 0.7
Pde6aP27664 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6aP27664 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6aP27664 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6aP27664 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Pde6aP27664 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.44■□□□□ 0.7
Pde6aP27664 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Pde6aP27664 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6aP27664 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Pde6aP27664 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.44■□□□□ 0.7
Pde6aP27664 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pde6aP27664 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6aP27664 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.43■□□□□ 0.7
Pde6aP27664 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6aP27664 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Pde6aP27664 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6aP27664 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6aP27664 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6aP27664 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6aP27664 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pde6aP27664 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6aP27664 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Pde6aP27664 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6aP27664 Gm13216-201ENSMUST00000117145 591 ntBASIC19.43■□□□□ 0.7
Pde6aP27664 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6aP27664 Gm11355-201ENSMUST00000121120 306 ntBASIC19.43■□□□□ 0.7
Pde6aP27664 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pde6aP27664 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6aP27664 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6aP27664 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.43■□□□□ 0.7
Pde6aP27664 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6aP27664 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6aP27664 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pde6aP27664 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6aP27664 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6aP27664 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.42■□□□□ 0.7
Pde6aP27664 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.42■□□□□ 0.7
Pde6aP27664 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pde6aP27664 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pde6aP27664 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pde6aP27664 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pde6aP27664 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pde6aP27664 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pde6aP27664 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pde6aP27664 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.41■□□□□ 0.7
Pde6aP27664 Gm18421-201ENSMUST00000204122 625 ntBASIC19.41■□□□□ 0.7
Pde6aP27664 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.41■□□□□ 0.7
Pde6aP27664 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pde6aP27664 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.41■□□□□ 0.7
Pde6aP27664 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6aP27664 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.4■□□□□ 0.7
Pde6aP27664 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6aP27664 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6aP27664 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6aP27664 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6aP27664 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6aP27664 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6aP27664 Gm23634-201ENSMUST00000175071 91 ntBASIC19.4■□□□□ 0.7
Pde6aP27664 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6aP27664 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6aP27664 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms