Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd40P27512 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cd40P27512 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Cd40P27512 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd40P27512 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cd40P27512 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.17■□□□□ 0.02
Cd40P27512 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cd40P27512 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cd40P27512 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Gm26039-201ENSMUST00000158152 144 ntBASIC15.17■□□□□ 0.02
Cd40P27512 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.17■□□□□ 0.02
Cd40P27512 Gm27389-201ENSMUST00000183622 195 ntBASIC15.17■□□□□ 0.02
Cd40P27512 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cd40P27512 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Gm10566-201ENSMUST00000086739 996 ntBASIC15.17■□□□□ 0.02
Cd40P27512 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cd40P27512 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cd40P27512 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd40P27512 Phf7-203ENSMUST00000226565 1971 ntBASIC15.16■□□□□ 0.02
Cd40P27512 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cd40P27512 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.16■□□□□ 0.02
Cd40P27512 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cd40P27512 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd40P27512 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cd40P27512 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd40P27512 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Cd40P27512 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd40P27512 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd40P27512 Gm22697-201ENSMUST00000175194 63 ntBASIC15.16■□□□□ 0.02
Cd40P27512 Gm10231-201ENSMUST00000181584 441 ntBASIC15.16■□□□□ 0.02
Cd40P27512 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd40P27512 Gm10175-202ENSMUST00000208752 441 ntBASIC15.16■□□□□ 0.02
Cd40P27512 Gm18032-201ENSMUST00000222541 538 ntBASIC15.16■□□□□ 0.02
Cd40P27512 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.16■□□□□ 0.02
Cd40P27512 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cd40P27512 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd40P27512 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cd40P27512 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cd40P27512 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cd40P27512 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cd40P27512 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cd40P27512 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.16■□□□□ 0.02
Cd40P27512 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd40P27512 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cd40P27512 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cd40P27512 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cd40P27512 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd40P27512 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd40P27512 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd40P27512 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd40P27512 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd40P27512 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cd40P27512 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cd40P27512 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd40P27512 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cd40P27512 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.15■□□□□ 0.02
Cd40P27512 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cd40P27512 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.15■□□□□ 0.02
Cd40P27512 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd40P27512 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd40P27512 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd40P27512 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cd40P27512 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd40P27512 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.15■□□□□ 0.02
Cd40P27512 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cd40P27512 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd40P27512 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd40P27512 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd40P27512 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.14■□□□□ 0.01
Cd40P27512 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd40P27512 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.14■□□□□ 0.01
Cd40P27512 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.14■□□□□ 0.01
Cd40P27512 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd40P27512 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd40P27512 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cd40P27512 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd40P27512 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.14■□□□□ 0.01
Cd40P27512 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd40P27512 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd40P27512 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd40P27512 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd40P27512 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd40P27512 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd40P27512 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd40P27512 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.14■□□□□ 0.01
Cd40P27512 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms