Protein–RNA interactions for Protein: P25785

Timp2, Metalloproteinase inhibitor 2, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp2P25785 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Timp2P25785 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Timp2P25785 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Timp2P25785 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Mir3081-201ENSMUST00000175305 84 ntBASIC16.43■□□□□ 0.22
Timp2P25785 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Gm28033-201ENSMUST00000184224 96 ntBASIC16.43■□□□□ 0.22
Timp2P25785 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.43■□□□□ 0.22
Timp2P25785 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Timp2P25785 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Timp2P25785 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.42■□□□□ 0.22
Timp2P25785 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Timp2P25785 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Timp2P25785 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Timp2P25785 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Timp2P25785 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Timp2P25785 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Timp2P25785 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Timp2P25785 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.42■□□□□ 0.22
Timp2P25785 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Timp2P25785 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Timp2P25785 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Timp2P25785 Gm27357-201ENSMUST00000183754 135 ntBASIC16.42■□□□□ 0.22
Timp2P25785 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Timp2P25785 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Timp2P25785 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.42■□□□□ 0.22
Timp2P25785 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Timp2P25785 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.42■□□□□ 0.22
Timp2P25785 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Timp2P25785 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Timp2P25785 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Timp2P25785 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.41■□□□□ 0.22
Timp2P25785 Gm18669-201ENSMUST00000216049 778 ntBASIC16.41■□□□□ 0.22
Timp2P25785 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Timp2P25785 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Timp2P25785 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Timp2P25785 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Timp2P25785 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Timp2P25785 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.4■□□□□ 0.22
Timp2P25785 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Timp2P25785 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.4■□□□□ 0.22
Timp2P25785 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.4■□□□□ 0.22
Timp2P25785 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.4■□□□□ 0.22
Timp2P25785 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Timp2P25785 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Timp2P25785 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Timp2P25785 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Timp2P25785 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Timp2P25785 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Timp2P25785 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.39■□□□□ 0.21
Timp2P25785 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Timp2P25785 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Timp2P25785 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Timp2P25785 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.39■□□□□ 0.21
Timp2P25785 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Timp2P25785 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms