Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.27■□□□□ 0.36
Hoxd8P23463 Gm6296-201ENSMUST00000222599 943 ntBASIC17.27■□□□□ 0.36
Hoxd8P23463 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.27■□□□□ 0.36
Hoxd8P23463 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.27■□□□□ 0.36
Hoxd8P23463 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxd8P23463 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxd8P23463 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Hoxd8P23463 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxd8P23463 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Hoxd8P23463 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxd8P23463 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxd8P23463 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxd8P23463 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.26■□□□□ 0.35
Hoxd8P23463 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxd8P23463 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.26■□□□□ 0.35
Hoxd8P23463 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxd8P23463 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.26■□□□□ 0.35
Hoxd8P23463 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hoxd8P23463 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxd8P23463 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.26■□□□□ 0.35
Hoxd8P23463 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.26■□□□□ 0.35
Hoxd8P23463 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxd8P23463 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxd8P23463 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxd8P23463 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxd8P23463 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxd8P23463 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxd8P23463 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxd8P23463 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxd8P23463 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxd8P23463 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Hoxd8P23463 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxd8P23463 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.25■□□□□ 0.35
Hoxd8P23463 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.25■□□□□ 0.35
Hoxd8P23463 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxd8P23463 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxd8P23463 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxd8P23463 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxd8P23463 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxd8P23463 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxd8P23463 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxd8P23463 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.25■□□□□ 0.35
Hoxd8P23463 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxd8P23463 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Hoxd8P23463 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxd8P23463 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.24■□□□□ 0.35
Hoxd8P23463 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxd8P23463 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxd8P23463 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.24■□□□□ 0.35
Hoxd8P23463 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm7862-201ENSMUST00000121461 292 ntBASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm44357-201ENSMUST00000195897 142 ntBASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm19658-201ENSMUST00000196231 138 ntBASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm44367-201ENSMUST00000196836 138 ntBASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm44350-201ENSMUST00000197197 138 ntBASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm44390-201ENSMUST00000197533 144 ntBASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm44313-201ENSMUST00000198018 138 ntBASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm44486-201ENSMUST00000198508 138 ntBASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm44314-201ENSMUST00000199263 138 ntBASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm44394-201ENSMUST00000199558 138 ntBASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm44484-201ENSMUST00000199873 138 ntBASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm44466-201ENSMUST00000200264 138 ntBASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm44359-201ENSMUST00000200671 138 ntBASIC17.24■□□□□ 0.35
Hoxd8P23463 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.24■□□□□ 0.35
Hoxd8P23463 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxd8P23463 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hoxd8P23463 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hoxd8P23463 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxd8P23463 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxd8P23463 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.23■□□□□ 0.35
Hoxd8P23463 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.23■□□□□ 0.35
Hoxd8P23463 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxd8P23463 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Hoxd8P23463 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxd8P23463 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.23■□□□□ 0.35
Hoxd8P23463 Gm18733-201ENSMUST00000173950 856 ntBASIC17.23■□□□□ 0.35
Hoxd8P23463 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxd8P23463 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.23■□□□□ 0.35
Hoxd8P23463 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxd8P23463 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxd8P23463 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxd8P23463 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxd8P23463 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxd8P23463 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxd8P23463 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxd8P23463 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hoxd8P23463 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxd8P23463 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxd8P23463 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxd8P23463 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxd8P23463 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxd8P23463 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.22■□□□□ 0.35
Hoxd8P23463 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxd8P23463 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxd8P23463 Gm36967-201ENSMUST00000193814 266 ntBASIC17.22■□□□□ 0.35
Hoxd8P23463 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hoxd8P23463 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxd8P23463 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms