Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd44P15379 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.63■□□□□ 0.41
Cd44P15379 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd44P15379 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd44P15379 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Cd44P15379 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cd44P15379 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cd44P15379 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cd44P15379 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd44P15379 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cd44P15379 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cd44P15379 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cd44P15379 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cd44P15379 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Cd44P15379 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.62■□□□□ 0.41
Cd44P15379 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Cd44P15379 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.62■□□□□ 0.41
Cd44P15379 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.62■□□□□ 0.41
Cd44P15379 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.62■□□□□ 0.41
Cd44P15379 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.62■□□□□ 0.41
Cd44P15379 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cd44P15379 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cd44P15379 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd44P15379 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd44P15379 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cd44P15379 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cd44P15379 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd44P15379 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.61■□□□□ 0.41
Cd44P15379 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cd44P15379 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cd44P15379 Gm7638-201ENSMUST00000121348 967 ntBASIC17.61■□□□□ 0.41
Cd44P15379 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.61■□□□□ 0.41
Cd44P15379 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd44P15379 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.61■□□□□ 0.41
Cd44P15379 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd44P15379 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd44P15379 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd44P15379 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd44P15379 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd44P15379 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cd44P15379 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cd44P15379 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Gm9731-201ENSMUST00000209480 747 ntBASIC17.6■□□□□ 0.41
Cd44P15379 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.6■□□□□ 0.41
Cd44P15379 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cd44P15379 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cd44P15379 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cd44P15379 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd44P15379 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cd44P15379 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd44P15379 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cd44P15379 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd44P15379 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cd44P15379 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd44P15379 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd44P15379 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd44P15379 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.59■□□□□ 0.41
Cd44P15379 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cd44P15379 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd44P15379 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd44P15379 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd44P15379 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cd44P15379 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd44P15379 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd44P15379 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd44P15379 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd44P15379 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd44P15379 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Cd44P15379 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd44P15379 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd44P15379 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Cd44P15379 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms