Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
Cxcl1P12850 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cxcl1P12850 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cxcl1P12850 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.92□□□□□ -0.18
Cxcl1P12850 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Gm10517-202ENSMUST00000192970 758 ntBASIC13.92□□□□□ -0.18
Cxcl1P12850 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.92□□□□□ -0.18
Cxcl1P12850 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.92□□□□□ -0.18
Cxcl1P12850 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.92□□□□□ -0.18
Cxcl1P12850 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cxcl1P12850 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Cxcl1P12850 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cxcl1P12850 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Cxcl1P12850 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.91□□□□□ -0.18
Cxcl1P12850 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Cxcl1P12850 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cxcl1P12850 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Gm37292-201ENSMUST00000192062 758 ntBASIC13.91□□□□□ -0.18
Cxcl1P12850 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cxcl1P12850 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
Cxcl1P12850 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cxcl1P12850 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cxcl1P12850 Gm12382-201ENSMUST00000122005 922 ntBASIC13.9□□□□□ -0.18
Cxcl1P12850 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Gm17661-201ENSMUST00000170317 270 ntBASIC13.9□□□□□ -0.18
Cxcl1P12850 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.9□□□□□ -0.18
Cxcl1P12850 Gm8495-201ENSMUST00000188740 694 ntBASIC13.9□□□□□ -0.18
Cxcl1P12850 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.9□□□□□ -0.18
Cxcl1P12850 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cxcl1P12850 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cxcl1P12850 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl1P12850 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cxcl1P12850 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl1P12850 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl1P12850 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cxcl1P12850 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Cxcl1P12850 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl1P12850 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl1P12850 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.89□□□□□ -0.19
Cxcl1P12850 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl1P12850 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl1P12850 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl1P12850 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl1P12850 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cxcl1P12850 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms