Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
P06328 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
P06328 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
P06328 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P06328 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
P06328 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P06328 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P06328 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P06328 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P06328 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P06328 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P06328 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
P06328 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
P06328 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P06328 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
P06328 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.29□□□□□ -0.44
P06328 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
P06328 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.29□□□□□ -0.44
P06328 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.29□□□□□ -0.44
P06328 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P06328 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
P06328 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
P06328 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.28□□□□□ -0.44
P06328 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.28□□□□□ -0.44
P06328 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
P06328 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Gm12527-201ENSMUST00000117967 564 ntBASIC12.28□□□□□ -0.44
P06328 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P06328 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P06328 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P06328 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
P06328 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P06328 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P06328 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
P06328 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
P06328 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
P06328 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
P06328 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P06328 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06328 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.27□□□□□ -0.45
P06328 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06328 Gm15378-201ENSMUST00000121894 207 ntBASIC12.27□□□□□ -0.45
P06328 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.27□□□□□ -0.45
P06328 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.27□□□□□ -0.45
P06328 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06328 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.27□□□□□ -0.45
P06328 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.27□□□□□ -0.45
P06328 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06328 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P06328 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06328 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06328 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.27□□□□□ -0.45
P06328 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06328 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
P06328 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06328 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P06328 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P06328 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
P06328 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P06328 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P06328 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P06328 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.26□□□□□ -0.45
P06328 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P06328 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P06328 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms