Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.34■□□□□ 0.37
CopeO89079 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.34■□□□□ 0.37
CopeO89079 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CopeO89079 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CopeO89079 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.33■□□□□ 0.37
CopeO89079 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CopeO89079 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CopeO89079 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.33■□□□□ 0.37
CopeO89079 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
CopeO89079 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CopeO89079 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
CopeO89079 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.33■□□□□ 0.37
CopeO89079 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CopeO89079 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CopeO89079 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CopeO89079 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CopeO89079 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CopeO89079 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CopeO89079 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CopeO89079 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CopeO89079 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CopeO89079 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CopeO89079 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CopeO89079 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CopeO89079 Gm24841-201ENSMUST00000158676 357 ntBASIC17.33■□□□□ 0.36
CopeO89079 Gm10517-202ENSMUST00000192970 758 ntBASIC17.33■□□□□ 0.36
CopeO89079 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CopeO89079 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CopeO89079 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CopeO89079 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CopeO89079 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CopeO89079 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CopeO89079 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CopeO89079 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CopeO89079 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CopeO89079 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CopeO89079 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CopeO89079 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CopeO89079 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CopeO89079 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.32■□□□□ 0.36
CopeO89079 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.32■□□□□ 0.36
CopeO89079 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CopeO89079 Gm37179-201ENSMUST00000194862 823 ntBASIC17.32■□□□□ 0.36
CopeO89079 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.32■□□□□ 0.36
CopeO89079 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.32■□□□□ 0.36
CopeO89079 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CopeO89079 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CopeO89079 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CopeO89079 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CopeO89079 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CopeO89079 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CopeO89079 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.31■□□□□ 0.36
CopeO89079 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CopeO89079 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CopeO89079 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CopeO89079 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.31■□□□□ 0.36
CopeO89079 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.31■□□□□ 0.36
CopeO89079 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CopeO89079 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CopeO89079 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CopeO89079 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CopeO89079 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CopeO89079 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CopeO89079 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CopeO89079 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CopeO89079 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.31■□□□□ 0.36
CopeO89079 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CopeO89079 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CopeO89079 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CopeO89079 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.3■□□□□ 0.36
CopeO89079 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.3■□□□□ 0.36
CopeO89079 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.3■□□□□ 0.36
CopeO89079 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CopeO89079 Gm37292-201ENSMUST00000192062 758 ntBASIC17.3■□□□□ 0.36
CopeO89079 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CopeO89079 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CopeO89079 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CopeO89079 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CopeO89079 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CopeO89079 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CopeO89079 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CopeO89079 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CopeO89079 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CopeO89079 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CopeO89079 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CopeO89079 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CopeO89079 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CopeO89079 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms