Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.19■□□□□ 0.02
Abcd4O89016 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Abcd4O89016 Gm7213-201ENSMUST00000215977 950 ntBASIC15.19■□□□□ 0.02
Abcd4O89016 Gm7370-201ENSMUST00000219471 767 ntBASIC15.19■□□□□ 0.02
Abcd4O89016 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abcd4O89016 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abcd4O89016 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abcd4O89016 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abcd4O89016 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abcd4O89016 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abcd4O89016 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abcd4O89016 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abcd4O89016 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abcd4O89016 Dancr-204ENSMUST00000132389 2347 ntBASIC15.18■□□□□ 0.02
Abcd4O89016 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Abcd4O89016 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Abcd4O89016 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Abcd4O89016 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Abcd4O89016 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Abcd4O89016 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Abcd4O89016 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.18■□□□□ 0.02
Abcd4O89016 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Abcd4O89016 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Abcd4O89016 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Abcd4O89016 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.18■□□□□ 0.02
Abcd4O89016 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Abcd4O89016 Gm21559-201ENSMUST00000220638 855 ntBASIC15.18■□□□□ 0.02
Abcd4O89016 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Abcd4O89016 Gm8587-201ENSMUST00000076538 843 ntBASIC15.18■□□□□ 0.02
Abcd4O89016 Gm10819-201ENSMUST00000099988 561 ntBASIC15.18■□□□□ 0.02
Abcd4O89016 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Abcd4O89016 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Abcd4O89016 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Abcd4O89016 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Abcd4O89016 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Abcd4O89016 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Abcd4O89016 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Abcd4O89016 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abcd4O89016 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Abcd4O89016 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abcd4O89016 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abcd4O89016 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Abcd4O89016 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abcd4O89016 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Abcd4O89016 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Abcd4O89016 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abcd4O89016 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Abcd4O89016 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abcd4O89016 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Abcd4O89016 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abcd4O89016 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Abcd4O89016 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Abcd4O89016 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Abcd4O89016 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abcd4O89016 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abcd4O89016 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abcd4O89016 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abcd4O89016 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abcd4O89016 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Abcd4O89016 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abcd4O89016 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abcd4O89016 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abcd4O89016 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Abcd4O89016 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Abcd4O89016 Gm18958-201ENSMUST00000174258 762 ntBASIC15.16■□□□□ 0.02
Abcd4O89016 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.16■□□□□ 0.02
Abcd4O89016 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Abcd4O89016 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Abcd4O89016 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abcd4O89016 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abcd4O89016 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abcd4O89016 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abcd4O89016 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.16■□□□□ 0.02
Abcd4O89016 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abcd4O89016 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abcd4O89016 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abcd4O89016 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abcd4O89016 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abcd4O89016 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.15■□□□□ 0.02
Abcd4O89016 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abcd4O89016 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abcd4O89016 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Abcd4O89016 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abcd4O89016 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.15■□□□□ 0.02
Abcd4O89016 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abcd4O89016 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Abcd4O89016 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.15■□□□□ 0.02
Abcd4O89016 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Abcd4O89016 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.15■□□□□ 0.02
Abcd4O89016 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abcd4O89016 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.15■□□□□ 0.02
Abcd4O89016 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.15■□□□□ 0.02
Abcd4O89016 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Abcd4O89016 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abcd4O89016 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abcd4O89016 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Abcd4O89016 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abcd4O89016 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Abcd4O89016 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.14■□□□□ 0.01
Abcd4O89016 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms