Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.11■□□□□ 0.17
Best1O88870 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.11■□□□□ 0.17
Best1O88870 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.11■□□□□ 0.17
Best1O88870 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Best1O88870 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Best1O88870 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Best1O88870 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Best1O88870 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Best1O88870 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Best1O88870 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Best1O88870 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.1■□□□□ 0.17
Best1O88870 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Best1O88870 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Best1O88870 Gm28033-201ENSMUST00000184224 96 ntBASIC16.1■□□□□ 0.17
Best1O88870 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Best1O88870 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.1■□□□□ 0.17
Best1O88870 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Best1O88870 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Best1O88870 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Best1O88870 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Best1O88870 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Best1O88870 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Best1O88870 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Best1O88870 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.1■□□□□ 0.17
Best1O88870 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Best1O88870 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Best1O88870 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.1■□□□□ 0.17
Best1O88870 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Best1O88870 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.1■□□□□ 0.17
Best1O88870 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Best1O88870 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Best1O88870 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Best1O88870 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Best1O88870 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.09■□□□□ 0.17
Best1O88870 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.09■□□□□ 0.17
Best1O88870 Gm44430-201ENSMUST00000203376 995 ntBASIC16.09■□□□□ 0.17
Best1O88870 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Best1O88870 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Best1O88870 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Best1O88870 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Best1O88870 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Best1O88870 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
Best1O88870 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Best1O88870 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Best1O88870 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Best1O88870 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Best1O88870 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Best1O88870 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Best1O88870 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Best1O88870 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Best1O88870 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Best1O88870 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.08■□□□□ 0.16
Best1O88870 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Best1O88870 Gm10052-201ENSMUST00000168019 960 ntBASIC16.08■□□□□ 0.16
Best1O88870 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Best1O88870 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Best1O88870 Gm7729-201ENSMUST00000050143 801 ntBASIC16.08■□□□□ 0.16
Best1O88870 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Best1O88870 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Best1O88870 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Best1O88870 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Best1O88870 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Best1O88870 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Best1O88870 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Best1O88870 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Best1O88870 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Best1O88870 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Best1O88870 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Best1O88870 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Best1O88870 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Best1O88870 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Best1O88870 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Best1O88870 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms