Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.36□□□□□ -0.11
Cldn1O88551 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.36□□□□□ -0.11
Cldn1O88551 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.36□□□□□ -0.11
Cldn1O88551 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.36□□□□□ -0.11
Cldn1O88551 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cldn1O88551 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Gm12895-201ENSMUST00000122214 226 ntBASIC14.35□□□□□ -0.11
Cldn1O88551 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.35□□□□□ -0.11
Cldn1O88551 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cldn1O88551 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn1O88551 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldn1O88551 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldn1O88551 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cldn1O88551 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldn1O88551 Gm37935-201ENSMUST00000192012 982 ntBASIC14.34□□□□□ -0.11
Cldn1O88551 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.34□□□□□ -0.11
Cldn1O88551 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.34□□□□□ -0.11
Cldn1O88551 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn1O88551 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn1O88551 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cldn1O88551 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.33□□□□□ -0.11
Cldn1O88551 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn1O88551 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn1O88551 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn1O88551 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn1O88551 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.33□□□□□ -0.12
Cldn1O88551 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.33□□□□□ -0.12
Cldn1O88551 Gm18206-201ENSMUST00000207027 926 ntBASIC14.33□□□□□ -0.12
Cldn1O88551 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.33□□□□□ -0.12
Cldn1O88551 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Fst-202ENSMUST00000223640 2612 ntBASIC14.33□□□□□ -0.12
Cldn1O88551 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn1O88551 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn1O88551 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms