Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.3■□□□□ 0.2
Cacna1hO88427 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cacna1hO88427 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Cacna1hO88427 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1hO88427 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1hO88427 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1hO88427 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1hO88427 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1hO88427 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1hO88427 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1hO88427 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.29■□□□□ 0.2
Cacna1hO88427 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna1hO88427 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.29■□□□□ 0.2
Cacna1hO88427 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna1hO88427 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.29■□□□□ 0.2
Cacna1hO88427 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.29■□□□□ 0.2
Cacna1hO88427 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna1hO88427 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Cacna1hO88427 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna1hO88427 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cacna1hO88427 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna1hO88427 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna1hO88427 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna1hO88427 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.29■□□□□ 0.2
Cacna1hO88427 Gm29707-201ENSMUST00000196325 491 ntBASIC16.29■□□□□ 0.2
Cacna1hO88427 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.29■□□□□ 0.2
Cacna1hO88427 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna1hO88427 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna1hO88427 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cacna1hO88427 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cacna1hO88427 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna1hO88427 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna1hO88427 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna1hO88427 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.28■□□□□ 0.2
Cacna1hO88427 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.28■□□□□ 0.2
Cacna1hO88427 Gm44335-201ENSMUST00000196879 141 ntBASIC16.28■□□□□ 0.2
Cacna1hO88427 Gm44297-201ENSMUST00000198304 141 ntBASIC16.28■□□□□ 0.2
Cacna1hO88427 Gm44346-201ENSMUST00000198851 141 ntBASIC16.28■□□□□ 0.2
Cacna1hO88427 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna1hO88427 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna1hO88427 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna1hO88427 Notumos-201ENSMUST00000151998 2659 ntBASIC16.28■□□□□ 0.2
Cacna1hO88427 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Cacna1hO88427 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna1hO88427 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna1hO88427 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna1hO88427 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cacna1hO88427 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna1hO88427 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna1hO88427 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cacna1hO88427 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna1hO88427 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cacna1hO88427 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.27■□□□□ 0.2
Cacna1hO88427 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.27■□□□□ 0.2
Cacna1hO88427 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cacna1hO88427 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cacna1hO88427 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cacna1hO88427 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.27■□□□□ 0.2
Cacna1hO88427 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.27■□□□□ 0.2
Cacna1hO88427 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.27■□□□□ 0.2
Cacna1hO88427 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cacna1hO88427 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cacna1hO88427 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cacna1hO88427 Fst-202ENSMUST00000223640 2612 ntBASIC16.27■□□□□ 0.19
Cacna1hO88427 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cacna1hO88427 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cacna1hO88427 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cacna1hO88427 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cacna1hO88427 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.27■□□□□ 0.19
Cacna1hO88427 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cacna1hO88427 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1hO88427 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1hO88427 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cacna1hO88427 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.26■□□□□ 0.19
Cacna1hO88427 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
Cacna1hO88427 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.26■□□□□ 0.19
Cacna1hO88427 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.26■□□□□ 0.19
Cacna1hO88427 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1hO88427 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1hO88427 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1hO88427 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1hO88427 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.26■□□□□ 0.19
Cacna1hO88427 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1hO88427 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1hO88427 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1hO88427 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1hO88427 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1hO88427 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1hO88427 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1hO88427 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1hO88427 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1hO88427 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cacna1hO88427 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Cacna1hO88427 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.25■□□□□ 0.19
Cacna1hO88427 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1hO88427 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cacna1hO88427 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1hO88427 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1hO88427 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1hO88427 Gm14127-201ENSMUST00000117906 678 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms