Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IkbkbO88351 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IkbkbO88351 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
IkbkbO88351 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
IkbkbO88351 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
IkbkbO88351 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
IkbkbO88351 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.54■□□□□ 0.56
IkbkbO88351 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.54■□□□□ 0.56
IkbkbO88351 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.54■□□□□ 0.56
IkbkbO88351 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
IkbkbO88351 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.54■□□□□ 0.56
IkbkbO88351 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
IkbkbO88351 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IkbkbO88351 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
IkbkbO88351 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
IkbkbO88351 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Gm17661-201ENSMUST00000170317 270 ntBASIC18.53■□□□□ 0.56
IkbkbO88351 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
IkbkbO88351 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.53■□□□□ 0.56
IkbkbO88351 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.53■□□□□ 0.56
IkbkbO88351 Gm18032-201ENSMUST00000222541 538 ntBASIC18.53■□□□□ 0.56
IkbkbO88351 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.53■□□□□ 0.56
IkbkbO88351 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.53■□□□□ 0.56
IkbkbO88351 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.53■□□□□ 0.56
IkbkbO88351 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IkbkbO88351 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.53■□□□□ 0.56
IkbkbO88351 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
IkbkbO88351 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IkbkbO88351 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IkbkbO88351 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IkbkbO88351 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IkbkbO88351 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.52■□□□□ 0.56
IkbkbO88351 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IkbkbO88351 Gm16061-201ENSMUST00000122167 857 ntBASIC18.52■□□□□ 0.56
IkbkbO88351 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
IkbkbO88351 Gm6659-201ENSMUST00000174752 547 ntBASIC18.52■□□□□ 0.56
IkbkbO88351 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.52■□□□□ 0.56
IkbkbO88351 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IkbkbO88351 Gm7370-201ENSMUST00000219471 767 ntBASIC18.52■□□□□ 0.56
IkbkbO88351 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IkbkbO88351 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.52■□□□□ 0.56
IkbkbO88351 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
IkbkbO88351 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
IkbkbO88351 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
IkbkbO88351 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
IkbkbO88351 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IkbkbO88351 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
IkbkbO88351 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
IkbkbO88351 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
IkbkbO88351 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IkbkbO88351 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
IkbkbO88351 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.51■□□□□ 0.55
IkbkbO88351 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
IkbkbO88351 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IkbkbO88351 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
IkbkbO88351 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IkbkbO88351 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.51■□□□□ 0.55
IkbkbO88351 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
IkbkbO88351 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IkbkbO88351 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
IkbkbO88351 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IkbkbO88351 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IkbkbO88351 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
IkbkbO88351 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IkbkbO88351 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
IkbkbO88351 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IkbkbO88351 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
IkbkbO88351 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IkbkbO88351 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
IkbkbO88351 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IkbkbO88351 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms