Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.81■□□□□ 0.76
Slc4a4O88343 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slc4a4O88343 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Slc4a4O88343 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc4a4O88343 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc4a4O88343 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc4a4O88343 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc4a4O88343 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc4a4O88343 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc4a4O88343 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc4a4O88343 Gm44450-201ENSMUST00000199528 114 ntBASIC19.8■□□□□ 0.76
Slc4a4O88343 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc4a4O88343 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc4a4O88343 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc4a4O88343 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc4a4O88343 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc4a4O88343 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc4a4O88343 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.8■□□□□ 0.76
Slc4a4O88343 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.79■□□□□ 0.76
Slc4a4O88343 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc4a4O88343 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.79■□□□□ 0.76
Slc4a4O88343 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc4a4O88343 Gm14859-201ENSMUST00000117752 357 ntBASIC19.79■□□□□ 0.76
Slc4a4O88343 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc4a4O88343 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc4a4O88343 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc4a4O88343 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc4a4O88343 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc4a4O88343 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc4a4O88343 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc4a4O88343 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc4a4O88343 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Slc4a4O88343 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Slc4a4O88343 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc4a4O88343 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Slc4a4O88343 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Slc4a4O88343 Gm27704-201ENSMUST00000185094 107 ntBASIC19.78■□□□□ 0.76
Slc4a4O88343 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc4a4O88343 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slc4a4O88343 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.77■□□□□ 0.76
Slc4a4O88343 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc4a4O88343 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.77■□□□□ 0.76
Slc4a4O88343 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc4a4O88343 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Slc4a4O88343 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc4a4O88343 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.77■□□□□ 0.76
Slc4a4O88343 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc4a4O88343 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc4a4O88343 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc4a4O88343 Gm10819-201ENSMUST00000099988 561 ntBASIC19.77■□□□□ 0.76
Slc4a4O88343 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc4a4O88343 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc4a4O88343 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Slc4a4O88343 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc4a4O88343 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.76■□□□□ 0.75
Slc4a4O88343 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc4a4O88343 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc4a4O88343 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc4a4O88343 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.76■□□□□ 0.75
Slc4a4O88343 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.76■□□□□ 0.75
Slc4a4O88343 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.76■□□□□ 0.75
Slc4a4O88343 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc4a4O88343 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Slc4a4O88343 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.76■□□□□ 0.75
Slc4a4O88343 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.76■□□□□ 0.75
Slc4a4O88343 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.76■□□□□ 0.75
Slc4a4O88343 Gm18421-201ENSMUST00000204122 625 ntBASIC19.76■□□□□ 0.75
Slc4a4O88343 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc4a4O88343 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Slc4a4O88343 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.76■□□□□ 0.75
Slc4a4O88343 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc4a4O88343 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc4a4O88343 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc4a4O88343 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc4a4O88343 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Slc4a4O88343 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc4a4O88343 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Slc4a4O88343 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc4a4O88343 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc4a4O88343 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc4a4O88343 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc4a4O88343 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc4a4O88343 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Slc4a4O88343 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc4a4O88343 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.75■□□□□ 0.75
Slc4a4O88343 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc4a4O88343 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.75■□□□□ 0.75
Slc4a4O88343 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc4a4O88343 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc4a4O88343 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc4a4O88343 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc4a4O88343 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc4a4O88343 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc4a4O88343 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Slc4a4O88343 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc4a4O88343 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc4a4O88343 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc4a4O88343 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Slc4a4O88343 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc4a4O88343 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms