Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Nid2O88322 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC21.82■■□□□ 1.08
Nid2O88322 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Nid2O88322 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nid2O88322 Gm7507-201ENSMUST00000183053 1008 ntBASIC21.82■■□□□ 1.08
Nid2O88322 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC21.82■■□□□ 1.08
Nid2O88322 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nid2O88322 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nid2O88322 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.82■■□□□ 1.08
Nid2O88322 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nid2O88322 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nid2O88322 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nid2O88322 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Nid2O88322 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nid2O88322 Gm8097-201ENSMUST00000117903 829 ntBASIC21.81■■□□□ 1.08
Nid2O88322 Gm12497-201ENSMUST00000138778 237 ntBASIC21.81■■□□□ 1.08
Nid2O88322 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC21.81■■□□□ 1.08
Nid2O88322 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC21.81■■□□□ 1.08
Nid2O88322 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC21.81■■□□□ 1.08
Nid2O88322 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC21.81■■□□□ 1.08
Nid2O88322 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nid2O88322 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nid2O88322 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Nid2O88322 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nid2O88322 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nid2O88322 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nid2O88322 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC21.8■■□□□ 1.08
Nid2O88322 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC21.8■■□□□ 1.08
Nid2O88322 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC21.8■■□□□ 1.08
Nid2O88322 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC21.8■■□□□ 1.08
Nid2O88322 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nid2O88322 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Nid2O88322 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC21.8■■□□□ 1.08
Nid2O88322 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nid2O88322 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nid2O88322 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Nid2O88322 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Nid2O88322 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nid2O88322 AC225888.1-201ENSMUST00000227184 728 ntBASIC21.8■■□□□ 1.08
Nid2O88322 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
Nid2O88322 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nid2O88322 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nid2O88322 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nid2O88322 Gm9889-202ENSMUST00000206983 1577 ntBASIC21.79■■□□□ 1.08
Nid2O88322 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Nid2O88322 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nid2O88322 Gm13036-201ENSMUST00000117799 748 ntBASIC21.79■■□□□ 1.08
Nid2O88322 Gm14822-201ENSMUST00000122247 291 ntBASIC21.79■■□□□ 1.08
Nid2O88322 Gm6089-201ENSMUST00000197666 938 ntBASIC21.79■■□□□ 1.08
Nid2O88322 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nid2O88322 AC114585.2-202ENSMUST00000228094 426 ntBASIC21.79■■□□□ 1.08
Nid2O88322 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nid2O88322 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nid2O88322 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nid2O88322 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nid2O88322 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Nid2O88322 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nid2O88322 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nid2O88322 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nid2O88322 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nid2O88322 Gm9727-201ENSMUST00000161387 555 ntBASIC21.78■■□□□ 1.08
Nid2O88322 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nid2O88322 Gm8349-201ENSMUST00000182720 1003 ntBASIC21.78■■□□□ 1.08
Nid2O88322 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nid2O88322 AC154757.1-201ENSMUST00000228289 336 ntBASIC21.78■■□□□ 1.08
Nid2O88322 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nid2O88322 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nid2O88322 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Nid2O88322 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nid2O88322 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nid2O88322 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nid2O88322 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nid2O88322 AC131586.3-201ENSMUST00000228355 1367 ntBASIC21.77■■□□□ 1.08
Nid2O88322 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nid2O88322 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nid2O88322 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Nid2O88322 Gm4459-201ENSMUST00000118750 468 ntBASIC21.77■■□□□ 1.08
Nid2O88322 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC21.77■■□□□ 1.08
Nid2O88322 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Nid2O88322 Gm24513-201ENSMUST00000174964 138 ntBASIC21.77■■□□□ 1.08
Nid2O88322 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nid2O88322 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nid2O88322 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Nid2O88322 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Nid2O88322 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Nid2O88322 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Nid2O88322 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nid2O88322 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nid2O88322 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC21.76■■□□□ 1.07
Nid2O88322 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Nid2O88322 Gm11780-201ENSMUST00000136880 516 ntBASIC21.76■■□□□ 1.07
Nid2O88322 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nid2O88322 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC21.76■■□□□ 1.07
Nid2O88322 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Nid2O88322 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nid2O88322 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Nid2O88322 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nid2O88322 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nid2O88322 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nid2O88322 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms