Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cfdp1O88271 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Cfdp1O88271 Gm14859-201ENSMUST00000117752 357 ntBASIC20.91■□□□□ 0.94
Cfdp1O88271 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cfdp1O88271 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cfdp1O88271 Gm27704-201ENSMUST00000185094 107 ntBASIC20.91■□□□□ 0.94
Cfdp1O88271 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.91■□□□□ 0.94
Cfdp1O88271 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.91■□□□□ 0.94
Cfdp1O88271 Gm18115-201ENSMUST00000221209 621 ntBASIC20.91■□□□□ 0.94
Cfdp1O88271 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cfdp1O88271 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cfdp1O88271 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cfdp1O88271 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cfdp1O88271 Gm10819-201ENSMUST00000099988 561 ntBASIC20.91■□□□□ 0.94
Cfdp1O88271 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cfdp1O88271 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cfdp1O88271 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cfdp1O88271 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cfdp1O88271 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cfdp1O88271 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cfdp1O88271 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.9■□□□□ 0.94
Cfdp1O88271 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cfdp1O88271 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cfdp1O88271 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cfdp1O88271 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cfdp1O88271 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Cfdp1O88271 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cfdp1O88271 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cfdp1O88271 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.9■□□□□ 0.94
Cfdp1O88271 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cfdp1O88271 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Cfdp1O88271 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cfdp1O88271 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cfdp1O88271 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Cfdp1O88271 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.89■□□□□ 0.93
Cfdp1O88271 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.89■□□□□ 0.93
Cfdp1O88271 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Cfdp1O88271 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cfdp1O88271 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cfdp1O88271 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cfdp1O88271 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cfdp1O88271 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cfdp1O88271 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfdp1O88271 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cfdp1O88271 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cfdp1O88271 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfdp1O88271 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cfdp1O88271 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfdp1O88271 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfdp1O88271 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfdp1O88271 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfdp1O88271 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfdp1O88271 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfdp1O88271 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cfdp1O88271 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Cfdp1O88271 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfdp1O88271 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.87■□□□□ 0.93
Cfdp1O88271 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cfdp1O88271 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfdp1O88271 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfdp1O88271 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfdp1O88271 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfdp1O88271 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.87■□□□□ 0.93
Cfdp1O88271 Gm44450-201ENSMUST00000199528 114 ntBASIC20.87■□□□□ 0.93
Cfdp1O88271 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cfdp1O88271 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfdp1O88271 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cfdp1O88271 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cfdp1O88271 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfdp1O88271 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfdp1O88271 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfdp1O88271 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cfdp1O88271 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfdp1O88271 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cfdp1O88271 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cfdp1O88271 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cfdp1O88271 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cfdp1O88271 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.86■□□□□ 0.93
Cfdp1O88271 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cfdp1O88271 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Cfdp1O88271 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cfdp1O88271 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cfdp1O88271 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cfdp1O88271 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cfdp1O88271 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cfdp1O88271 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.86■□□□□ 0.93
Cfdp1O88271 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cfdp1O88271 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.86■□□□□ 0.93
Cfdp1O88271 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cfdp1O88271 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cfdp1O88271 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cfdp1O88271 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cfdp1O88271 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.85■□□□□ 0.93
Cfdp1O88271 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cfdp1O88271 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cfdp1O88271 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Cfdp1O88271 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.85■□□□□ 0.93
Cfdp1O88271 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cfdp1O88271 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cfdp1O88271 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms