Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc3O88196 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc3O88196 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc3O88196 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc3O88196 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ttc3O88196 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc3O88196 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.54■□□□□ 0.4
Ttc3O88196 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc3O88196 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc3O88196 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc3O88196 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.54■□□□□ 0.4
Ttc3O88196 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.54■□□□□ 0.4
Ttc3O88196 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc3O88196 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc3O88196 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.53■□□□□ 0.4
Ttc3O88196 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.53■□□□□ 0.4
Ttc3O88196 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.53■□□□□ 0.4
Ttc3O88196 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.53■□□□□ 0.4
Ttc3O88196 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.53■□□□□ 0.4
Ttc3O88196 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc3O88196 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc3O88196 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc3O88196 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc3O88196 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.53■□□□□ 0.4
Ttc3O88196 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc3O88196 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc3O88196 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc3O88196 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc3O88196 Mir8098-201ENSMUST00000184011 137 ntBASIC17.53■□□□□ 0.4
Ttc3O88196 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.53■□□□□ 0.4
Ttc3O88196 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc3O88196 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.53■□□□□ 0.4
Ttc3O88196 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ttc3O88196 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc3O88196 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ttc3O88196 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ttc3O88196 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ttc3O88196 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ttc3O88196 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.52■□□□□ 0.4
Ttc3O88196 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Gm28659-201ENSMUST00000188013 759 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Gm44357-201ENSMUST00000195897 142 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Gm19658-201ENSMUST00000196231 138 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Gm44367-201ENSMUST00000196836 138 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Gm44350-201ENSMUST00000197197 138 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Gm44390-201ENSMUST00000197533 144 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Gm44313-201ENSMUST00000198018 138 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Gm44486-201ENSMUST00000198508 138 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Gm44454-201ENSMUST00000198541 138 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Gm44314-201ENSMUST00000199263 138 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Gm44394-201ENSMUST00000199558 138 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Gm44484-201ENSMUST00000199873 138 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Gm44466-201ENSMUST00000200264 138 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Gm44359-201ENSMUST00000200671 138 ntBASIC17.52■□□□□ 0.4
Ttc3O88196 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ttc3O88196 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ttc3O88196 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ttc3O88196 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
Ttc3O88196 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ttc3O88196 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ttc3O88196 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ttc3O88196 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ttc3O88196 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.52■□□□□ 0.39
Ttc3O88196 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Ttc3O88196 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ttc3O88196 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ttc3O88196 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Ttc3O88196 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ttc3O88196 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ttc3O88196 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ttc3O88196 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ttc3O88196 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ttc3O88196 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ttc3O88196 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ttc3O88196 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ttc3O88196 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ttc3O88196 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ttc3O88196 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ttc3O88196 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ttc3O88196 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ttc3O88196 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc3O88196 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc3O88196 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc3O88196 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Ttc3O88196 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ttc3O88196 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc3O88196 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.5■□□□□ 0.39
Ttc3O88196 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Ttc3O88196 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc3O88196 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.5■□□□□ 0.39
Ttc3O88196 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc3O88196 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.5■□□□□ 0.39
Ttc3O88196 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc3O88196 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.5■□□□□ 0.39
Ttc3O88196 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ttc3O88196 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ttc3O88196 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ttc3O88196 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc3O88196 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc3O88196 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms