Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.44■□□□□ 0.54
Trdmt1O55055 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.44■□□□□ 0.54
Trdmt1O55055 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trdmt1O55055 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.44■□□□□ 0.54
Trdmt1O55055 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trdmt1O55055 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trdmt1O55055 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trdmt1O55055 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trdmt1O55055 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trdmt1O55055 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trdmt1O55055 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trdmt1O55055 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trdmt1O55055 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.43■□□□□ 0.54
Trdmt1O55055 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.43■□□□□ 0.54
Trdmt1O55055 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trdmt1O55055 Gm18206-201ENSMUST00000207027 926 ntBASIC18.43■□□□□ 0.54
Trdmt1O55055 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.43■□□□□ 0.54
Trdmt1O55055 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.43■□□□□ 0.54
Trdmt1O55055 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trdmt1O55055 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trdmt1O55055 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.43■□□□□ 0.54
Trdmt1O55055 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trdmt1O55055 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trdmt1O55055 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trdmt1O55055 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trdmt1O55055 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trdmt1O55055 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trdmt1O55055 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trdmt1O55055 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.42■□□□□ 0.54
Trdmt1O55055 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trdmt1O55055 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trdmt1O55055 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.42■□□□□ 0.54
Trdmt1O55055 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Trdmt1O55055 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trdmt1O55055 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trdmt1O55055 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trdmt1O55055 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trdmt1O55055 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trdmt1O55055 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trdmt1O55055 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trdmt1O55055 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.41■□□□□ 0.54
Trdmt1O55055 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.41■□□□□ 0.54
Trdmt1O55055 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trdmt1O55055 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.41■□□□□ 0.54
Trdmt1O55055 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.41■□□□□ 0.54
Trdmt1O55055 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trdmt1O55055 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trdmt1O55055 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trdmt1O55055 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.41■□□□□ 0.54
Trdmt1O55055 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trdmt1O55055 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trdmt1O55055 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trdmt1O55055 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trdmt1O55055 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trdmt1O55055 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trdmt1O55055 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdmt1O55055 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.4■□□□□ 0.54
Trdmt1O55055 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.4■□□□□ 0.54
Trdmt1O55055 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdmt1O55055 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdmt1O55055 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdmt1O55055 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trdmt1O55055 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdmt1O55055 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdmt1O55055 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdmt1O55055 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdmt1O55055 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trdmt1O55055 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdmt1O55055 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdmt1O55055 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trdmt1O55055 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdmt1O55055 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.39■□□□□ 0.54
Trdmt1O55055 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trdmt1O55055 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trdmt1O55055 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trdmt1O55055 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Trdmt1O55055 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trdmt1O55055 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.39■□□□□ 0.53
Trdmt1O55055 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Trdmt1O55055 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.39■□□□□ 0.53
Trdmt1O55055 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trdmt1O55055 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trdmt1O55055 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdmt1O55055 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.38■□□□□ 0.53
Trdmt1O55055 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms