Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.46■□□□□ 0.55
Prom1O54990 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Prom1O54990 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prom1O54990 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Prom1O54990 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prom1O54990 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prom1O54990 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prom1O54990 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prom1O54990 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prom1O54990 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prom1O54990 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prom1O54990 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.45■□□□□ 0.54
Prom1O54990 Gm13312-201ENSMUST00000119631 718 ntBASIC18.45■□□□□ 0.54
Prom1O54990 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.45■□□□□ 0.54
Prom1O54990 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prom1O54990 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.45■□□□□ 0.54
Prom1O54990 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.45■□□□□ 0.54
Prom1O54990 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.45■□□□□ 0.54
Prom1O54990 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prom1O54990 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prom1O54990 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.45■□□□□ 0.54
Prom1O54990 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Prom1O54990 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prom1O54990 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prom1O54990 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prom1O54990 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prom1O54990 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prom1O54990 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prom1O54990 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prom1O54990 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Prom1O54990 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prom1O54990 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Prom1O54990 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prom1O54990 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prom1O54990 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Prom1O54990 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prom1O54990 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Prom1O54990 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Prom1O54990 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prom1O54990 Gm6296-201ENSMUST00000222599 943 ntBASIC18.44■□□□□ 0.54
Prom1O54990 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.44■□□□□ 0.54
Prom1O54990 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prom1O54990 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.44■□□□□ 0.54
Prom1O54990 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prom1O54990 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Prom1O54990 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prom1O54990 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prom1O54990 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prom1O54990 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prom1O54990 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prom1O54990 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prom1O54990 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prom1O54990 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.43■□□□□ 0.54
Prom1O54990 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prom1O54990 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prom1O54990 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.43■□□□□ 0.54
Prom1O54990 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.43■□□□□ 0.54
Prom1O54990 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.43■□□□□ 0.54
Prom1O54990 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.43■□□□□ 0.54
Prom1O54990 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prom1O54990 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prom1O54990 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prom1O54990 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.43■□□□□ 0.54
Prom1O54990 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.43■□□□□ 0.54
Prom1O54990 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prom1O54990 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prom1O54990 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.42■□□□□ 0.54
Prom1O54990 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prom1O54990 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prom1O54990 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prom1O54990 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Prom1O54990 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prom1O54990 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prom1O54990 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prom1O54990 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prom1O54990 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.42■□□□□ 0.54
Prom1O54990 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prom1O54990 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prom1O54990 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prom1O54990 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prom1O54990 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prom1O54990 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.41■□□□□ 0.54
Prom1O54990 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prom1O54990 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.41■□□□□ 0.54
Prom1O54990 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.41■□□□□ 0.54
Prom1O54990 Gm5867-201ENSMUST00000063197 592 ntBASIC18.41■□□□□ 0.54
Prom1O54990 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prom1O54990 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prom1O54990 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.41■□□□□ 0.54
Prom1O54990 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.41■□□□□ 0.54
Prom1O54990 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prom1O54990 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prom1O54990 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prom1O54990 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prom1O54990 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prom1O54990 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.4■□□□□ 0.54
Prom1O54990 Gm18733-201ENSMUST00000173950 856 ntBASIC18.4■□□□□ 0.54
Prom1O54990 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.4■□□□□ 0.54
Prom1O54990 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.4■□□□□ 0.54
Prom1O54990 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms