Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cldn5O54942 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Cldn5O54942 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.41■□□□□ 0.38
Cldn5O54942 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn5O54942 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn5O54942 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn5O54942 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cldn5O54942 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.41■□□□□ 0.38
Cldn5O54942 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.41■□□□□ 0.38
Cldn5O54942 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn5O54942 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.4■□□□□ 0.38
Cldn5O54942 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn5O54942 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn5O54942 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cldn5O54942 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn5O54942 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.4■□□□□ 0.38
Cldn5O54942 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn5O54942 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.4■□□□□ 0.38
Cldn5O54942 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.4■□□□□ 0.38
Cldn5O54942 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn5O54942 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cldn5O54942 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn5O54942 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cldn5O54942 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.4■□□□□ 0.38
Cldn5O54942 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn5O54942 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
Cldn5O54942 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn5O54942 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn5O54942 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn5O54942 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn5O54942 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.39■□□□□ 0.37
Cldn5O54942 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.39■□□□□ 0.37
Cldn5O54942 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn5O54942 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn5O54942 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn5O54942 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn5O54942 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cldn5O54942 Gm18421-201ENSMUST00000204122 625 ntBASIC17.39■□□□□ 0.37
Cldn5O54942 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn5O54942 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn5O54942 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn5O54942 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn5O54942 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn5O54942 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cldn5O54942 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Cldn5O54942 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.38■□□□□ 0.37
Cldn5O54942 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.38■□□□□ 0.37
Cldn5O54942 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.38■□□□□ 0.37
Cldn5O54942 Gm29707-201ENSMUST00000196325 491 ntBASIC17.38■□□□□ 0.37
Cldn5O54942 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cldn5O54942 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cldn5O54942 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Cldn5O54942 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn5O54942 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.37■□□□□ 0.37
Cldn5O54942 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cldn5O54942 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.37■□□□□ 0.37
Cldn5O54942 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cldn5O54942 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cldn5O54942 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.37■□□□□ 0.37
Cldn5O54942 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cldn5O54942 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn5O54942 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn5O54942 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn5O54942 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cldn5O54942 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn5O54942 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.36■□□□□ 0.37
Cldn5O54942 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.36■□□□□ 0.37
Cldn5O54942 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms