Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DffbO54788 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
DffbO54788 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
DffbO54788 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
DffbO54788 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.42□□□□□ -0.1
DffbO54788 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
DffbO54788 Gm13158-201ENSMUST00000122007 736 ntBASIC14.42□□□□□ -0.1
DffbO54788 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DffbO54788 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
DffbO54788 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.41□□□□□ -0.1
DffbO54788 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
DffbO54788 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.41□□□□□ -0.1
DffbO54788 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
DffbO54788 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
DffbO54788 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.41□□□□□ -0.1
DffbO54788 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
DffbO54788 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.41□□□□□ -0.1
DffbO54788 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.41□□□□□ -0.1
DffbO54788 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
DffbO54788 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DffbO54788 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DffbO54788 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
DffbO54788 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
DffbO54788 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DffbO54788 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DffbO54788 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.4□□□□□ -0.1
DffbO54788 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
DffbO54788 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
DffbO54788 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.4□□□□□ -0.1
DffbO54788 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DffbO54788 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.4□□□□□ -0.1
DffbO54788 Gm4974-201ENSMUST00000209974 875 ntBASIC14.4□□□□□ -0.1
DffbO54788 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DffbO54788 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
DffbO54788 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
DffbO54788 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
DffbO54788 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DffbO54788 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DffbO54788 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DffbO54788 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DffbO54788 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
DffbO54788 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DffbO54788 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.39□□□□□ -0.11
DffbO54788 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.39□□□□□ -0.11
DffbO54788 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.39□□□□□ -0.11
DffbO54788 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms