Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.72■□□□□ 0.11
Abca4O35600 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Abca4O35600 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca4O35600 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca4O35600 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Abca4O35600 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Abca4O35600 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Abca4O35600 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Abca4O35600 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Abca4O35600 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.11
Abca4O35600 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.71■□□□□ 0.11
Abca4O35600 Gm29707-201ENSMUST00000196325 491 ntBASIC15.71■□□□□ 0.11
Abca4O35600 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.71■□□□□ 0.11
Abca4O35600 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.71■□□□□ 0.11
Abca4O35600 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Abca4O35600 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Abca4O35600 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Abca4O35600 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Abca4O35600 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Abca4O35600 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
Abca4O35600 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.1
Abca4O35600 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.71■□□□□ 0.1
Abca4O35600 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Abca4O35600 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.7■□□□□ 0.1
Abca4O35600 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.7■□□□□ 0.1
Abca4O35600 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Gm4459-201ENSMUST00000118750 468 ntBASIC15.7■□□□□ 0.1
Abca4O35600 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Abca4O35600 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Abca4O35600 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Abca4O35600 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.69■□□□□ 0.1
Abca4O35600 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Abca4O35600 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.69■□□□□ 0.1
Abca4O35600 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.69■□□□□ 0.1
Abca4O35600 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.69■□□□□ 0.1
Abca4O35600 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.69■□□□□ 0.1
Abca4O35600 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Abca4O35600 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.69■□□□□ 0.1
Abca4O35600 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Abca4O35600 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca4O35600 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.68■□□□□ 0.1
Abca4O35600 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.68■□□□□ 0.1
Abca4O35600 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.68■□□□□ 0.1
Abca4O35600 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca4O35600 Gm2423-201ENSMUST00000074863 733 ntBASIC15.68■□□□□ 0.1
Abca4O35600 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca4O35600 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.68■□□□□ 0.1
Abca4O35600 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca4O35600 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Abca4O35600 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca4O35600 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Abca4O35600 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Abca4O35600 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.68■□□□□ 0.1
Abca4O35600 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca4O35600 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.68■□□□□ 0.1
Abca4O35600 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.68■□□□□ 0.1
Abca4O35600 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.68■□□□□ 0.1
Abca4O35600 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.68■□□□□ 0.1
Abca4O35600 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.68■□□□□ 0.1
Abca4O35600 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Abca4O35600 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.68■□□□□ 0.1
Abca4O35600 Fst-202ENSMUST00000223640 2612 ntBASIC15.68■□□□□ 0.1
Abca4O35600 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca4O35600 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Abca4O35600 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Abca4O35600 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Abca4O35600 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.68■□□□□ 0.1
Abca4O35600 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Abca4O35600 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Abca4O35600 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Abca4O35600 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms