Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc1a6O35544 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc1a6O35544 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc1a6O35544 Gm13158-201ENSMUST00000122007 736 ntBASIC16.56■□□□□ 0.24
Slc1a6O35544 Gm17661-201ENSMUST00000170317 270 ntBASIC16.56■□□□□ 0.24
Slc1a6O35544 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc1a6O35544 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc1a6O35544 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc1a6O35544 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Slc1a6O35544 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc1a6O35544 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc1a6O35544 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc1a6O35544 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc1a6O35544 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Slc1a6O35544 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc1a6O35544 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc1a6O35544 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc1a6O35544 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Slc1a6O35544 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc1a6O35544 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc1a6O35544 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.55■□□□□ 0.24
Slc1a6O35544 Gm12933-201ENSMUST00000120203 872 ntBASIC16.55■□□□□ 0.24
Slc1a6O35544 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.55■□□□□ 0.24
Slc1a6O35544 Gm42545-201ENSMUST00000202755 922 ntBASIC16.55■□□□□ 0.24
Slc1a6O35544 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.55■□□□□ 0.24
Slc1a6O35544 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc1a6O35544 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc1a6O35544 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc1a6O35544 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc1a6O35544 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc1a6O35544 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc1a6O35544 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Slc1a6O35544 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Slc1a6O35544 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Slc1a6O35544 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc1a6O35544 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc1a6O35544 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.54■□□□□ 0.24
Slc1a6O35544 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Slc1a6O35544 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc1a6O35544 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc1a6O35544 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc1a6O35544 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc1a6O35544 Gm12896-201ENSMUST00000118430 226 ntBASIC16.54■□□□□ 0.24
Slc1a6O35544 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.54■□□□□ 0.24
Slc1a6O35544 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.54■□□□□ 0.24
Slc1a6O35544 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc1a6O35544 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc1a6O35544 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc1a6O35544 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc1a6O35544 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc1a6O35544 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Slc1a6O35544 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc1a6O35544 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc1a6O35544 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc1a6O35544 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc1a6O35544 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc1a6O35544 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc1a6O35544 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc1a6O35544 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Slc1a6O35544 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Slc1a6O35544 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Slc1a6O35544 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc1a6O35544 Gm10517-202ENSMUST00000192970 758 ntBASIC16.53■□□□□ 0.24
Slc1a6O35544 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc1a6O35544 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Slc1a6O35544 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Slc1a6O35544 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.53■□□□□ 0.24
Slc1a6O35544 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Slc1a6O35544 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc1a6O35544 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc1a6O35544 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.53■□□□□ 0.24
Slc1a6O35544 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc1a6O35544 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc1a6O35544 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.52■□□□□ 0.24
Slc1a6O35544 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Gm27405-201ENSMUST00000184201 112 ntBASIC16.52■□□□□ 0.24
Slc1a6O35544 Gm37292-201ENSMUST00000192062 758 ntBASIC16.52■□□□□ 0.24
Slc1a6O35544 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.52■□□□□ 0.24
Slc1a6O35544 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc1a6O35544 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc1a6O35544 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc1a6O35544 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc1a6O35544 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.52■□□□□ 0.23
Slc1a6O35544 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Slc1a6O35544 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc1a6O35544 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms