Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn6O35454 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn6O35454 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn6O35454 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn6O35454 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn6O35454 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Clcn6O35454 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.91■□□□□ 0.46
Clcn6O35454 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.91■□□□□ 0.46
Clcn6O35454 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC17.91■□□□□ 0.46
Clcn6O35454 Gm42732-201ENSMUST00000202887 1197 ntBASIC17.91■□□□□ 0.46
Clcn6O35454 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn6O35454 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Clcn6O35454 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Clcn6O35454 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn6O35454 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Clcn6O35454 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn6O35454 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn6O35454 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.91■□□□□ 0.46
Clcn6O35454 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn6O35454 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn6O35454 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn6O35454 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clcn6O35454 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.9■□□□□ 0.46
Clcn6O35454 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Clcn6O35454 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn6O35454 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Clcn6O35454 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn6O35454 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn6O35454 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn6O35454 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.9■□□□□ 0.46
Clcn6O35454 Gm9723-201ENSMUST00000192100 457 ntBASIC17.9■□□□□ 0.46
Clcn6O35454 Gm45574-201ENSMUST00000210921 331 ntBASIC17.9■□□□□ 0.46
Clcn6O35454 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn6O35454 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.9■□□□□ 0.46
Clcn6O35454 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn6O35454 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Clcn6O35454 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn6O35454 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn6O35454 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clcn6O35454 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Clcn6O35454 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clcn6O35454 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Clcn6O35454 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.89■□□□□ 0.46
Clcn6O35454 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.89■□□□□ 0.45
Clcn6O35454 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Gm12527-201ENSMUST00000117967 564 ntBASIC17.89■□□□□ 0.45
Clcn6O35454 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.89■□□□□ 0.45
Clcn6O35454 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.89■□□□□ 0.45
Clcn6O35454 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.89■□□□□ 0.45
Clcn6O35454 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC17.89■□□□□ 0.45
Clcn6O35454 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.89■□□□□ 0.45
Clcn6O35454 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC17.89■□□□□ 0.45
Clcn6O35454 AC132433.1-201ENSMUST00000221553 1101 ntBASIC17.89■□□□□ 0.45
Clcn6O35454 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Clcn6O35454 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Clcn6O35454 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.89■□□□□ 0.45
Clcn6O35454 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Clcn6O35454 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Clcn6O35454 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clcn6O35454 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.89■□□□□ 0.45
Clcn6O35454 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clcn6O35454 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Clcn6O35454 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.88■□□□□ 0.45
Clcn6O35454 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.88■□□□□ 0.45
Clcn6O35454 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Clcn6O35454 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.88■□□□□ 0.45
Clcn6O35454 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clcn6O35454 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms