Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Prrt1O35449 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Prrt1O35449 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.23□□□□□ -0.13
Prrt1O35449 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Prrt1O35449 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.23□□□□□ -0.13
Prrt1O35449 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prrt1O35449 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Prrt1O35449 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.22□□□□□ -0.13
Prrt1O35449 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Prrt1O35449 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Prrt1O35449 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Prrt1O35449 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prrt1O35449 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prrt1O35449 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prrt1O35449 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prrt1O35449 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prrt1O35449 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prrt1O35449 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prrt1O35449 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prrt1O35449 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prrt1O35449 Gm11643-201ENSMUST00000119578 864 ntBASIC14.21□□□□□ -0.13
Prrt1O35449 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.21□□□□□ -0.13
Prrt1O35449 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Prrt1O35449 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.21□□□□□ -0.13
Prrt1O35449 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Prrt1O35449 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Prrt1O35449 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Prrt1O35449 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Prrt1O35449 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Prrt1O35449 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Prrt1O35449 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prrt1O35449 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prrt1O35449 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prrt1O35449 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Prrt1O35449 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Prrt1O35449 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prrt1O35449 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prrt1O35449 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prrt1O35449 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prrt1O35449 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Prrt1O35449 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prrt1O35449 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prrt1O35449 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prrt1O35449 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prrt1O35449 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prrt1O35449 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.2□□□□□ -0.14
Prrt1O35449 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prrt1O35449 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Prrt1O35449 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.2□□□□□ -0.14
Prrt1O35449 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prrt1O35449 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prrt1O35449 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Prrt1O35449 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prrt1O35449 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prrt1O35449 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prrt1O35449 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prrt1O35449 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prrt1O35449 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Prrt1O35449 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Prrt1O35449 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prrt1O35449 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Prrt1O35449 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Prrt1O35449 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prrt1O35449 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prrt1O35449 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms