Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Tnfrsf11aO35305 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfrsf11aO35305 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 Gm22697-201ENSMUST00000175194 63 ntBASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfrsf11aO35305 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Gm44450-201ENSMUST00000199528 114 ntBASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Gm21559-201ENSMUST00000220638 855 ntBASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Gm8587-201ENSMUST00000076538 843 ntBASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfrsf11aO35305 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11aO35305 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11aO35305 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11aO35305 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11aO35305 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Tnfrsf11aO35305 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.02■□□□□ 0.48
Tnfrsf11aO35305 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.02■□□□□ 0.48
Tnfrsf11aO35305 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11aO35305 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Tnfrsf11aO35305 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11aO35305 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11aO35305 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11aO35305 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfrsf11aO35305 Haglr-201ENSMUST00000100000 2085 ntBASIC18.02■□□□□ 0.47
Tnfrsf11aO35305 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfrsf11aO35305 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfrsf11aO35305 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Gm13836-201ENSMUST00000121159 501 ntBASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfrsf11aO35305 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11aO35305 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11aO35305 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11aO35305 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11aO35305 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11aO35305 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11aO35305 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18■□□□□ 0.47
Tnfrsf11aO35305 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11aO35305 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms