Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3aO08759 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ube3aO08759 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.15■□□□□ 0.5
Ube3aO08759 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.15■□□□□ 0.5
Ube3aO08759 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ube3aO08759 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube3aO08759 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Ube3aO08759 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ube3aO08759 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ube3aO08759 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ube3aO08759 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3aO08759 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3aO08759 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3aO08759 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Ube3aO08759 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3aO08759 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3aO08759 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3aO08759 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3aO08759 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.14■□□□□ 0.49
Ube3aO08759 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.14■□□□□ 0.49
Ube3aO08759 Gm20760-201ENSMUST00000179197 648 ntBASIC18.14■□□□□ 0.49
Ube3aO08759 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.14■□□□□ 0.49
Ube3aO08759 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3aO08759 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.14■□□□□ 0.49
Ube3aO08759 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.14■□□□□ 0.49
Ube3aO08759 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3aO08759 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube3aO08759 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube3aO08759 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.13■□□□□ 0.49
Ube3aO08759 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube3aO08759 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.13■□□□□ 0.49
Ube3aO08759 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube3aO08759 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube3aO08759 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube3aO08759 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.13■□□□□ 0.49
Ube3aO08759 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ube3aO08759 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.13■□□□□ 0.49
Ube3aO08759 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube3aO08759 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube3aO08759 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube3aO08759 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.13■□□□□ 0.49
Ube3aO08759 Dio3-201ENSMUST00000097228 1449 ntBASIC18.13■□□□□ 0.49
Ube3aO08759 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ube3aO08759 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube3aO08759 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube3aO08759 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube3aO08759 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ube3aO08759 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube3aO08759 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube3aO08759 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube3aO08759 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.12■□□□□ 0.49
Ube3aO08759 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ube3aO08759 Gm20049-201ENSMUST00000219950 730 ntBASIC18.12■□□□□ 0.49
Ube3aO08759 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube3aO08759 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.12■□□□□ 0.49
Ube3aO08759 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube3aO08759 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ube3aO08759 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ube3aO08759 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube3aO08759 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube3aO08759 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube3aO08759 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.11■□□□□ 0.49
Ube3aO08759 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube3aO08759 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube3aO08759 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube3aO08759 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube3aO08759 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube3aO08759 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube3aO08759 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube3aO08759 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube3aO08759 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ube3aO08759 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
Ube3aO08759 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ube3aO08759 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.11■□□□□ 0.49
Ube3aO08759 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ube3aO08759 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.11■□□□□ 0.49
Ube3aO08759 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.11■□□□□ 0.49
Ube3aO08759 Gm4974-201ENSMUST00000209974 875 ntBASIC18.11■□□□□ 0.49
Ube3aO08759 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.11■□□□□ 0.49
Ube3aO08759 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube3aO08759 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Ube3aO08759 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms