Protein–RNA interactions for Protein: J3QMQ6

Gm3336, Predicted gene 3336, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3336J3QMQ6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3336J3QMQ6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3336J3QMQ6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3336J3QMQ6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Gm3336J3QMQ6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Gm3336J3QMQ6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3336J3QMQ6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3336J3QMQ6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3336J3QMQ6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.26■□□□□ 0.35
Gm3336J3QMQ6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.26■□□□□ 0.35
Gm3336J3QMQ6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3336J3QMQ6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3336J3QMQ6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3336J3QMQ6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Gm25016-201ENSMUST00000158399 131 ntBASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Gm17808-201ENSMUST00000200859 894 ntBASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Gm18421-201ENSMUST00000204122 625 ntBASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3336J3QMQ6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3336J3QMQ6 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3336J3QMQ6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm3336J3QMQ6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3336J3QMQ6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms